Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0738 ATGATGGTTGCTGCAGTATCAGCTACACCAAATCCGAAGACCTCGTCGCGAGAAGGGAGTCATCAGAACCCTACAAGGCCTCCTCTGATTCCTTCTGAGGCCGACAATGGGGTGGCTCTTCGAAGACCTAAGGGTAGAGAGGTTACTTCCCGCTACCTATCTTCTTCTACTTCTACTTCCACTTCTTCTTCCACGTCTTCCTCTTCGTCTTCCAGGCGCTGCGCATCTCCATTGGTTTCCAGGACCGCGTCTTCCTCCGCTGTTATGACGCCGATGCCTGCGCCTTCCTCTCTGATCAAGAGGTCGCAGTCTGTGGAGCGGAGGCGCCCGGTGACGCCTCGTCCCAATACCTTTGATTTCAGACCTGGCAATGCTGGAGAAGTGACCACCGCTTCTAAGATGTTAATTACGTCCGCCAGGAGTTTGTCGGTTTCCTTTCAGGGGGAGTCGTTCTCGCTTCGGGTTAGTAAGACAAAGCCGGCGCCGGCTAGTGTGAGGAAAGGTACTCCGGAGAGGAGGAAGCCAACGCCGACGAGAGCGGATCAAACGGAGAATTCTAAGCCTGTTGATCAGCATCGGTGGCCTGGGAGGTCGCGGCAGGTTAATTCATTGACTAGAAGCATGGATTGTACTGATGAGAAGAAGAAATTGGGTGGATCTGGGATTATGGCTAGGTCGTTGCAGCAATCTATGATTGATGAAAGAAATCGGACTCCATTGGATGGAAGATTGAATTTGGATTCGGGCAATGCCGAGTTGGGAAAGGCAAATGAACTTGTTAATGCCAATTCAGTTGTTGGATCTACTATGACATCTGATCCTGCTGCTTCTGATACAGAAAGTGTATCTTCTGGAAGCACGTCTGGAGCACAGGAGTCTGGTGGCGGAGGTGGTGGTACTCAAGGGCGGGGTGTGCCCCGGGGGATCATGGTGCCCGCAAGGTTTTGGCAAGAGACTAGTAATAGGTTGCGCCGTACACCAGAGCCCAGCTCACCACAGTCAAAGAGCAATGGATTGAGAACACCGGCAGTCCCACCGAAGCTCATTGCGCCTAAGAAATTGTTAACTGACAGTCCTATGTCGTCTCCCCGGGGAATCCTACCTAGCAGGGGGCAGTCTCCTCTACGTGGGCCTGTTAGGCCGGCATCGCCAAGTAAGCTTGTGACAACCTCTACATATTCTCCCTTAAGGGGGATGCCCAGTCCAACTCGGGTTAGGGCAGTGGTTGGCTCACTGAATGGTAATTTGAGCAACAACCCATCTATTCTCAGTTTTGCTGCTGATGTACGGCGGGGGAAGGTGGGGGAGAACCGTATGGTTGATGCACACTTATTGAGGCTTTTGCATAACCGCTATTTGCAATGGCGATTTATAAATGCCAGGGCGGATGCTTCCTTGTTGGTCCAAAGAATGAATGCGGAGCAAAGCCTGTGTAATGCACGGGTAGCTATTGTGGATCTGCGTGATTCTGTCAGGGACAAAAGAAAGATGTTACAACTGATGAGGCAAAAGTTGAAGCTAACAACAATCCTCAAGGGGCAAATCATGTATTTGGACGAGTGGGGTCCTATGGACAGGGACCACTCAAATTCCTTGTCCGGGGCCATCGAAGCTTTGAAGGCCAGCACTCTCCGCCTTCCTGTTGTTAGTGGAGCAAGGGCAGACATCCAAAATTTGAAGGATGCAATTTGTTCAGCAGTTGATGTGATGCAGGCAATGGCATCCTCAATATGCTCTTTGTTATCAAAGGTGGAGGAGGTGAACTCCTTGGTGGCTGAACTTGCAAATACATCTGCAAAAGAGCGAGCTTGTCTTGATCAGTGCAGAGATCTCTTATCAACACTAGCAGCCATGCAGGTGACGGATTGTAGCCTGAGAACTCATATATTACAACTAAATCGTGTACCATCAAGCCTGACAACAAAAGTGTAA 1932 0.5041 MMVAAVSATPNPKTSSREGSHQNPTRPPLIPSEADNGVALRRPKGREVTSRYLSSSTSTSTSSSTSSSSSSRRCASPLVSRTASSSAVMTPMPAPSSLIKRSQSVERRRPVTPRPNTFDFRPGNAGEVTTASKMLITSARSLSVSFQGESFSLRVSKTKPAPASVRKGTPERRKPTPTRADQTENSKPVDQHRWPGRSRQVNSLTRSMDCTDEKKKLGGSGIMARSLQQSMIDERNRTPLDGRLNLDSGNAELGKANELVNANSVVGSTMTSDPAASDTESVSSGSTSGAQESGGGGGGTQGRGVPRGIMVPARFWQETSNRLRRTPEPSSPQSKSNGLRTPAVPPKLIAPKKLLTDSPMSSPRGILPSRGQSPLRGPVRPASPSKLVTTSTYSPLRGMPSPTRVRAVVGSLNGNLSNNPSILSFAADVRRGKVGENRMVDAHLLRLLHNRYLQWRFINARADASLLVQRMNAEQSLCNARVAIVDLRDSVRDKRKMLQLMRQKLKLTTILKGQIMYLDEWGPMDRDHSNSLSGAIEALKASTLRLPVVSGARADIQNLKDAICSAVDVMQAMASSICSLLSKVEEVNSLVAELANTSAKERACLDQCRDLLSTLAAMQVTDCSLRTHILQLNRVPSSLTTKV* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0738 643 PANTHER AUGMIN FAMILY MEMBER 31 634 - -
Vvi18g0738 643 MobiDBLite consensus disorder prediction 319 340 - -
Vvi18g0738 643 MobiDBLite consensus disorder prediction 268 399 - -
Vvi18g0738 643 MobiDBLite consensus disorder prediction 49 101 - -
Vvi18g0738 643 MobiDBLite consensus disorder prediction 1 125 - -
Vvi18g0738 643 MobiDBLite consensus disorder prediction 166 194 - -
Vvi18g0738 643 MobiDBLite consensus disorder prediction 384 398 - -
Vvi18g0738 643 MobiDBLite consensus disorder prediction 8 29 - -
Vvi18g0738 643 Pfam QWRF family 281 606 IPR007573 -
Vvi18g0738 643 MobiDBLite consensus disorder prediction 153 217 - -
Vvi18g0738 643 MobiDBLite consensus disorder prediction 268 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0738 Vvi-Chr18 7749907 7763469 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0738 - - vvi:100242050 1153.66