Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0730 ATGGTTGCCGGGGTCATTGTTGGAGACTTTGAATTAAGCCGACGTGTCTTCATGGTCTTGTTTCGCATATCTTCCAATAGGGATCCTGGTGCTCGGGCTGTTGACACCCTCAGTTCAAAGGATCATGCAGTCCTTTTGCAGGAAAAGAGGCTGCTTGATTTACCCAGATTGTTAGATATATGTGCTATATATGGTTGTGAAAATGAAGATTTGACCAGATCACTGGTTGTGAATGCTTTGAAAGCACAGCCTTGGATCCATGATAATTTAATTGCAGTGATGTCTCATTTCTTGAGCATTGTCCACACAATGCACCAACGTTGCAGCTCGTCTTTGGAGGCTCTTTTTTCTTCTGGAGGCTATGAAGACCAGGGATCCATCCAACTTTATTCAGATTTTTTAGAGGTAATGGACTTCATTAATGATGCCATTGTTTCCTTGGATGCATTTGTGCATGCATACAAACCCGCAGCAGTGTTCTTCTCTTGCCCTGTTGAGATGAGTTATGGGAATGAGGAATTGCTCCACACTCTTGCAAGACTGTACAATTCATTACTACCATCTATACAGCAGGGATTTCAAATCCTGTTTACAGCTGGGGATGTACTTCAGAAGTCATTTGGTATTACCCTTTCAGATATTGCTATTTGTTTGAAGATGGTGTCAATGAGGATCATTGAGCTTGGTTGGAAAGTATTGGACTTATGCTATCTAAGTAATACGTTATTTGAAGTCAGTCTCCCCCTTCCAGCTGCCACAAAGATATTTCCTGCTAAAGTTGAGGATCCTGTCATAAGGGCAGATATTTTAATTCAGACTATTAGAGAGATCAATGGATTTCCAGAACATGTTCAGGAAAACCAGCCCAAAAACCAGCCCAGGGAAACATTTCTTCAAAATATTGAAAAGAATTACAAGATGATGAGAAAACTTGAGAGTTTGCATGATACTGGATGGATTTTCATGGACGATGAACAATTTCATTATTTATCTGGCATCTTAGCACTTCCTTTAGAAGCTAGTGTTAAGAAGACATCTTATGAGCCAATCCCTGCAACAAGTGACAAGATGCATGTGGATGAAGATGCTGCAATTATGGAGTCCAAAATAAGTCAAATTAGAGATCTATTCCCTGATTATGGTAAAGGGTTCTTGTCTGCATGTCTTGAAGCGTATAACCAGAATCCAGAAGAGGTGATTCAAAGGATTCTAGAGGGAACCTTGCATGAAGATCTGCAGTCCCTGGACACTTCATTAGAGACTATCCCACAACCCAAGTCTATTCCATCTGTGAGCAAGAATGATAAGGGAAAAGAGAAGTTATTTGAATCAACGGCTCTATCCTCCGCTAATGCTGTAACTGTATCAGGGGAGCCACAAACTGAGAGCTCATCATTTTCATTCTCATCTTCAGTTGGGAGGTACACAAGGAAGTCTAAAGTTAATTTACCCAATTATAAGACCCTTGATTCTAGAAGTGAGCAGGATTCTGCAAAAACTGCAGCTCTAGTTATGCAGTATGAGTATGAAGATGAGTATGATGACTCTTTTGATGATTTAGGTCTGAGTGTTGTGGAGTCAGGATTAGCAGAAACTGAGATATTGGAAGACAAAATCAACTCTAATCTTGGAAAACCTTGGGGGACACAAAGTGAAACATTTGGTCCAAGTGATTCTTCGAAATGGAACTCACGGAAGAAGCCCCAATTCTATGTGAAGGATGGTAAGAATTACAGTTACAAAATTGCAGGTTCAGTTGCTGCTGCAAATTGTATTGAAGCATCAATAGTTAATCAAGCCCAGAAAGAATTAATCCATGGCCTTGGTCGAGGTGGCAACCTTCCTCTAGGTGCAGTTAAGAAGCTGACAGAGTTAAATGAGGATGAAGATGAACAGTCTGAAATTGTGGAGATGGGAGGAAGAGGGAAGCCAGGGAATTTCAGGGGCAGGGGAAGGAGGGGAGTTACTCCAGGTGCAGTTAAGAAGCCGACAGAGTCCAATGAGGTGCAAGATGACCAGTCTGACGTGTCAGAGATGGGAGGAAGGGGGAATTCCAGAGGTAGGGGTAGGGGTAGGAGGGGAGGGGGAAGAAATTACAGGAAGGATCAGGCCATGAAAAAGCATTTTTCGGGATTGACTGGTTTCTAG 2148 0.419 MVAGVIVGDFELSRRVFMVLFRISSNRDPGARAVDTLSSKDHAVLLQEKRLLDLPRLLDICAIYGCENEDLTRSLVVNALKAQPWIHDNLIAVMSHFLSIVHTMHQRCSSSLEALFSSGGYEDQGSIQLYSDFLEVMDFINDAIVSLDAFVHAYKPAAVFFSCPVEMSYGNEELLHTLARLYNSLLPSIQQGFQILFTAGDVLQKSFGITLSDIAICLKMVSMRIIELGWKVLDLCYLSNTLFEVSLPLPAATKIFPAKVEDPVIRADILIQTIREINGFPEHVQENQPKNQPRETFLQNIEKNYKMMRKLESLHDTGWIFMDDEQFHYLSGILALPLEASVKKTSYEPIPATSDKMHVDEDAAIMESKISQIRDLFPDYGKGFLSACLEAYNQNPEEVIQRILEGTLHEDLQSLDTSLETIPQPKSIPSVSKNDKGKEKLFESTALSSANAVTVSGEPQTESSSFSFSSSVGRYTRKSKVNLPNYKTLDSRSEQDSAKTAALVMQYEYEDEYDDSFDDLGLSVVESGLAETEILEDKINSNLGKPWGTQSETFGPSDSSKWNSRKKPQFYVKDGKNYSYKIAGSVAAANCIEASIVNQAQKELIHGLGRGGNLPLGAVKKLTELNEDEDEQSEIVEMGGRGKPGNFRGRGRRGVTPGAVKKPTESNEVQDDQSDVSEMGGRGNSRGRGRGRRGGGRNYRKDQAMKKHFSGLTGF* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0730 715 MobiDBLite consensus disorder prediction 627 715 - -
Vvi18g0730 715 CDD CUE_ASCC2 367 406 IPR041800 -
Vvi18g0730 715 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 2 714 - -
Vvi18g0730 715 SMART cue_7 365 407 IPR003892 GO:0043130
Vvi18g0730 715 SUPERFAMILY UBA-like 365 422 IPR009060 GO:0005515
Vvi18g0730 715 ProSiteProfiles CUE domain profile. 365 408 IPR003892 GO:0043130
Vvi18g0730 715 Pfam CUE domain 367 407 IPR003892 GO:0043130
Vvi18g0730 715 Gene3D - 365 408 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0730 K18667 - vvi:100854438 1373.22