Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0723 ATGATAAGAGTGGGAAGTACCTTTCAAGCTATGGAAAAACTTTTTGGTTTCATTGCTTGTTGCTTTGTCTGGTTCAATAATGCCGCTTATCCTAGTGAGTTTTACGGGCCAACTAGACCCGAAGCTTCTCAACCTCAAGCATTTACTTTTCTAGTTAGAGACCAGCATCTTGGGGCTAATGTGGGATCCGCTCAAGGACCCACTGGTTTAGGTAAATATCTAATGCATTCCCCGACTAGAGAAGTCATTTTTAGAAGAGAAACTATGCGTTTTTGGGATCTGCATGCTCCCTGGTTAGAACCTCTAAGGGGTCCCAATGGTTTGGACTTGAGTAGGCTGAAAAAAAACAGAAGGCAAATCGATATAGGCTTCTCATGGTGTAACCGTGTAAGCATCTACCTCACAGACATGGCTGCGAGGGCGGGGAAGTCGCAGGAGATGGATCCCGGAATATGGGGCCACTTGCCGGTGGAGCTTCTGGAACATGTGCTATCTTTTCTCCCTCTCAAAAGCTTCTTCAATCTCCTATGTACCTGTAAACGCTTCAAATCTTTAATTTACTCTCCTTCATTCCTGGCCAAGTATTCTCCTTCTTCTTCTTCTTCTTCTTCTTCACCCGCTCTCTCATCTTTTCTCTTACTTTCTCATCCACAGTTCTACCGCCACCGACTCCCTCTCTATGACTCAGCCATTGGCAACTGGCGCAATTTATCTCTCACCTGCTCTATTCTCTTACCCTACGCCGCCACCACCGCGATCACGCTGCTCTCCGCCGCCAATGGACTCCTCTGCTTCTCTTTACCCAACTCATCTTCTTTCCTGGTCTGCAATCTCTTGGTAGGATCCTCCAGAGTCCTCCAATTCCCTGGATACCCTTTTGCCTTTGAAATGCTGACCTTGGTTCCTGCCCCGGATGGGTACAAGATCTTCATGATCGCTTCTGGGTCCTCTTCCAACAACGCTTGGGTGTATGATTCCGGGGTTCATTCATGGCGAGAATTCCAGGGTTTCGATCCGACTTTGAGCGACAATTGTCATCAAGGAGTTTACTGTAATGGGGTTCTGTATTTTTGTACGTCTGAGCCGTTTTCCATAGTGTGTTTTGATTTGGAGAGTGGGGTGTGGGACAGATCGGTTGTGGAGTTGCCGGGGGAGCTGACGTTTGTGAAATTAGTGAGCGATGGAGAAGGGAAGCTGTATTTGGTTGGTGGGATTGGGAGGAATGGGATTTCCAAAAGTATGAAATTGTGGGAATTGGAAGGAGAGAATTGGGTGCTGGTGGAGAGTCTGCCGGAATTCATGTGCCAAAAATTGGTTTCCGTGTGTTATCACAATTACGAGCATGTGTATTGCTTTTGGCACCAGGAGACGATCTGTGTATGCTGCTATACTTGGCCCGAGATTTTGTATTACAAGGTCGCTAGGAGGACTTGGCATTGGCTGCCTAAATGCCCTTCATTGCCTGACAAATGGAGCTGTGGTTTCAGGTGGTTTTCTTTTGTTCCAGAATTATATGCGCAATGTGGTTGTCTGCCATCTGTCCTCCTAGTGGCTAGCCTTCTGTAA 1566 0.47 MIRVGSTFQAMEKLFGFIACCFVWFNNAAYPSEFYGPTRPEASQPQAFTFLVRDQHLGANVGSAQGPTGLGKYLMHSPTREVIFRRETMRFWDLHAPWLEPLRGPNGLDLSRLKKNRRQIDIGFSWCNRVSIYLTDMAARAGKSQEMDPGIWGHLPVELLEHVLSFLPLKSFFNLLCTCKRFKSLIYSPSFLAKYSPSSSSSSSSPALSSFLLLSHPQFYRHRLPLYDSAIGNWRNLSLTCSILLPYAATTAITLLSAANGLLCFSLPNSSSFLVCNLLVGSSRVLQFPGYPFAFEMLTLVPAPDGYKIFMIASGSSSNNAWVYDSGVHSWREFQGFDPTLSDNCHQGVYCNGVLYFCTSEPFSIVCFDLESGVWDRSVVELPGELTFVKLVSDGEGKLYLVGGIGRNGISKSMKLWELEGENWVLVESLPEFMCQKLVSVCYHNYEHVYCFWHQETICVCCYTWPEILYYKVARRTWHWLPKCPSLPDKWSCGFRWFSFVPELYAQCGCLPSVLLVASLL* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0723 521 Pfam F-box domain 154 191 IPR001810 GO:0005515
Vvi18g0723 521 SMART fbox_2 155 195 IPR001810 GO:0005515
Vvi18g0723 521 PANTHER BNACNNG10540D PROTEIN 140 505 - -
Vvi18g0723 521 Pfam Photosystem II protein 13 100 IPR000932 GO:0009521|GO:0009767|GO:0016020|GO:0016168|GO:0019684
Vvi18g0723 521 Gene3D photosystem ii from thermosynechococcus elongatus 37 134 IPR044900 -
Vvi18g0723 521 SUPERFAMILY Galactose oxidase, central domain 258 486 IPR011043 -
Vvi18g0723 521 Gene3D - 140 191 - -
Vvi18g0723 521 FunFam F-box family protein 215 495 - -
Vvi18g0723 521 SUPERFAMILY F-box domain 146 227 IPR036047 GO:0005515
Vvi18g0723 521 ProSiteProfiles F-box domain profile. 149 195 IPR001810 GO:0005515
Vvi18g0723 521 Gene3D - 224 496 IPR015915 GO:0005515
Vvi18g0723 521 FunFam F-box domain containing protein 140 194 - -
Vvi18g0723 521 SUPERFAMILY Photosystem II antenna protein-like 14 136 IPR036001 GO:0009521|GO:0009767|GO:0016020|GO:0016168|GO:0019684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0723 - - vvi:100260898 764.222