Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0715 ATGTCGAACCTCACAACCGACGCTGTGACTTCAGTTTCATTTTCGGATTTCCCTGAAGATGTCCAGCTCTGTATCCTCTCCTTCTTGACTCCCTCCGAGATCGCCACCTTCGCTTGCACATCAAAACGCTTCCTTTCACTCTGTACCTGCGACAGCAAGCTCTGGTTCACTCTTTGCGACAGGAGATGGGGGTCCAAGACCCAGATCAAGAAATGGGGATCCGGTAAAATCACCTACAGACTCCTCTACAGGACCCTGATCGAGTGGGAAAATCTGATTGGTTTCTGGCGTCGAAGCGGTCAGGTAACCCTCGGCGTCGCATCTCCACCCTTGATTTTCTTTGAATGGTGTCCATCGTTTATTATTGGGTCTAGGGTTTCTCCTTCTAGACTTGGTACTTATCACGTGATAAAGGCTCCATTCTTATGTATGAGTATCACCCCAGAGGGCGAGACTATGAATTTTCTCGACCCCGATGGGAAAATCGAATCGTCGGAAGATTTCGTGAACGCGGTGCAAGCAGGGTTTCTAGAGAACGATTTGATTCCAGTTCATGTCAGTTTCATGGGGAAAAACCATGTTGTTGTAGAGGAAAACTTGAGCTTTACTTCTTTGAATTCTCAAGAACCAAAAAATACTGGGTTTCGGAGGAGTTCGAGTTCCGGTAACGTGAGAGCAGAGGATATTGGGGTTGTGGAGGACATGATTGGCGCGGAGAGCGGGTCGCCAGGGAGTTTGCCGGACAGATTCATGTCGGAAATTTATCAATACTTTGCGAACAGAACGAGCCCGGGTGGGGAGAGGGCGTCGAGGAGGCAGAGGAAGAGAGAGAAGGCAAGGCAGGGTAGGAGGAAGTGGATGCCTGAGCATTTTGTTAAAATTGTTAACTGTTCCCCCACACCATCAAGGCCTTTACAGGGACTATGGAAGGGTATATCTGATGATAAGAACTTGTACTTTTTTCTTGTGGCATATGATGACATTGGAGGCATTGCCTGTCGAACAATTGGGGACTCATCTAAACCTTTGTCTGGTTACTCCCCTGTATTTTGGACTTCAAAAACTACATTTTTAGAGGCTCCATTTTCTCCTGAAGAAGAATATTTATATGATAGTCGCATACATCTTCGGCCACTTGCAACAGCAGATCACATTCATGAGCATCATCCCTTGACAGAAAATGAAGTGGTTTCACACATACTTTGCATAAATTCAAGTTATGATCTGGTAATTCCAGACTTGGCTGGAACTTCTGCAAATCCACGGGATGTGGAAGGAAGGATTTGGCTGTATGAGAGTGGGACATTTGGGTTTGGGTTTCTCAGGAACCATTTCATTGTAGACCTGAAACATATTGCACAACATGGCTGTCTTCTTGAGGCAATGGAACTTTGTAGTGATTTGTGCTAG 1410 0.4603 MSNLTTDAVTSVSFSDFPEDVQLCILSFLTPSEIATFACTSKRFLSLCTCDSKLWFTLCDRRWGSKTQIKKWGSGKITYRLLYRTLIEWENLIGFWRRSGQVTLGVASPPLIFFEWCPSFIIGSRVSPSRLGTYHVIKAPFLCMSITPEGETMNFLDPDGKIESSEDFVNAVQAGFLENDLIPVHVSFMGKNHVVVEENLSFTSLNSQEPKNTGFRRSSSSGNVRAEDIGVVEDMIGAESGSPGSLPDRFMSEIYQYFANRTSPGGERASRRQRKREKARQGRRKWMPEHFVKIVNCSPTPSRPLQGLWKGISDDKNLYFFLVAYDDIGGIACRTIGDSSKPLSGYSPVFWTSKTTFLEAPFSPEEEYLYDSRIHLRPLATADHIHEHHPLTENEVVSHILCINSSYDLVIPDLAGTSANPRDVEGRIWLYESGTFGFGFLRNHFIVDLKHIAQHGCLLEAMELCSDLC* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0715 469 ProSiteProfiles F-box domain profile. 11 58 IPR001810 GO:0005515
Vvi18g0715 469 Gene3D - 1 91 - -
Vvi18g0715 469 SMART fbox_2 17 58 IPR001810 GO:0005515
Vvi18g0715 469 PANTHER F-BOX ONLY PROTEIN 48-RELATED 13 307 IPR045118 GO:0019005|GO:0031146
Vvi18g0715 469 SUPERFAMILY F-box domain 3 87 IPR036047 GO:0005515
Vvi18g0715 469 Pfam F-box domain 14 49 IPR001810 GO:0005515
Vvi18g0715 469 CDD F-box_SF 15 49 - -
Vvi18g0715 469 MobiDBLite consensus disorder prediction 262 284 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0715 - - vvi:100245525 970.304