Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0710 ATGTCAGGGCGGAAAGAAGAGAATATTGGACGGAGAGGTAGGGCGGCGGTGGTGGTTCTCGGCGACATTGGCCGCAGCCCTCGAATGCAGTACCATGCCCTCTCACTTGCTCGCCAGGCTTCTCTAGAGGTGGACATTGTTGCATATGGAGGTTCTACTCCCCACTCTGCTGTTTTAGAGAACCCGTCTATTCATATTCACACAATGAAACAGTGGCCAACAATCCCTCGGATTGTATCAAAGATATTTTATCCCTTGGTTCTTCTCTTCAAGGCATTGTTTCAGTTTTTTACACTTTTTTGGTTTCTCTGTGTTAAAATACCTTCTCCAGATGTTTTTATAGTGCAGAATCCACCTTCTGTTCCAACCTTGGTGGCTGTTAAATGGGCAAGCTGGCTGAGAAATTCAGCATTTATTGTTGATTGGCATAACTTTGGATATACTTTATTGGGATTATCTCTTGGAAGAAGTAGTCGCTTTGTGGCACTCTATCATTGGTTTGAGAAGTACTATGGGAAGGCTGCAAATGGTTCATTATGTGTTACAAGAGCAATGCAGCATGAGTTGGCGCAGAACTGGGGAATTAAAGCCACAGTTCTATATGATCAACCTCCTGAATTCTTTCGTCCCACTCCAATGGAAGAGAAGCATAAGTTGTTCTGTAGATTACATAAAGATCTCTGTCATCCTCGTGGTGGTCAAGATTGTGTCACTGCTGGAACCATGGAACTGTGGAACCAGGATACAGATGAGACTCTGTTTACCGCTAAGATGGACACGGACATTTTCTTGAAGTCAAACAGGCCAGCACTTGTTGTTAGTAGTACAAGCTGGACTCCAGATGAAGATTTTGGCATGCTCTTGGAAGCAGCAGTTATGTATGATAGACGTGTGGCTGCAATTTTGAATGAAGATGATTCAACTAAAGAAGAGGTTCTTTGGAAGGAAACTAATAGTGGGAAACAATTCTTATATCCAAGGTTACTTTTTATCATTACAGGTAAAGGGCCGAACAAAGAAAAATATGAAGAAAAAATAAGGCAGTTAAAACTCAATCGCGTGGCTTTTCGTACAATGTGGTTGTCAGCTGAGGATTATCCATTGCTTCTTGGATCAGCTGATCTGGGTATATGCCTACATACTTCTTCATCAGGATTGGACCTGCCTATGAAGGTGGTGGATATGTTTGGTTGTGGACTTCCTGTTTGTGCTGTTTCCTACTCCTGCATTGAGGAACTTGTGAAAGTTGAGAAAAATGGCCTTCTATTTTCATCATCCTCGGAGCTAGCTAATGAACTCTTGATGCTCTTTAAGGGTTTTCCGGACAACTGTGATGCTCTGAAGTTGTTAAGAAATGGTGTAGTGGAAGCGGGATTTTCAGCTAGGTGGGATACTGAATGGGAAAGGCATGCCAAGCCATTGATATCCAAGGTTATCTCTGAGCATTGTCATTAA 1455 0.4261 MSGRKEENIGRRGRAAVVVLGDIGRSPRMQYHALSLARQASLEVDIVAYGGSTPHSAVLENPSIHIHTMKQWPTIPRIVSKIFYPLVLLFKALFQFFTLFWFLCVKIPSPDVFIVQNPPSVPTLVAVKWASWLRNSAFIVDWHNFGYTLLGLSLGRSSRFVALYHWFEKYYGKAANGSLCVTRAMQHELAQNWGIKATVLYDQPPEFFRPTPMEEKHKLFCRLHKDLCHPRGGQDCVTAGTMELWNQDTDETLFTAKMDTDIFLKSNRPALVVSSTSWTPDEDFGMLLEAAVMYDRRVAAILNEDDSTKEEVLWKETNSGKQFLYPRLLFIITGKGPNKEKYEEKIRQLKLNRVAFRTMWLSAEDYPLLLGSADLGICLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIEELVKVEKNGLLFSSSSELANELLMLFKGFPDNCDALKLLRNGVVEAGFSARWDTEWERHAKPLISKVISEHCH* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0710 484 PANTHER BETA1,4 MANNOSYLTRANSFERASE 6 477 IPR026051 GO:0000030
Vvi18g0710 484 Gene3D Glycogen Phosphorylase B; 255 453 - -
Vvi18g0710 484 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 320 440 - -
Vvi18g0710 484 Coils Coil 339 359 - -
Vvi18g0710 484 FunFam UDP-glycosyltransferase TURAN isoform X1 255 450 - -
Vvi18g0710 484 Pfam Glycosyl transferases group 1 328 437 - -
Vvi18g0710 484 Pfam Glycosyl transferase 4-like domain 33 197 IPR028098 -
Vvi18g0710 484 CDD GT33_ALG1-like 10 475 - -
Vvi18g0710 484 FunFam Chitobiosyldiphosphodolichol beta-mannosyltransferase 24 203 - -
Vvi18g0710 484 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 32 216 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0710 9 481 Glycosyltransferase AT1G16570 66.270 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0710 K03842 - vvi:100247296 986.482