Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0705 ATGGCCGGTGATGCTGCCGGGGGTGGCGACAGTGCTGGCGACTTGCAGCCGCATCCGGTGTTGGAACAGCTCCCTGGCATTCAGTATTGCATGAACAGCCCTCCTCCGTGGCCTGAAGCTATTTTGTTGGGCTTTCAACATTATCTTTTGACTCTTGGAATTACTGTTTTGATTCCCAGTATATTAGTTCCTCAAATGGGTGGTGGCAATGATGAAAAGGCAAGGGCAATTCAAACCTTACTCTTTGTTTCAGGACTCAACACACTCTTGCAATCTTTCTTTGGAACCCGACTTCCAAATATGGTTGTGGGATCATACGCATTTTTAGTTCCTGCAACTTCTATTCTCCTATCCAAGAGATATAATAAATTTGAAGATCCCCTTGAGAGGTATGAACAGACAATGAGAGGTATACAGGGTGCTTTAATTGCAACTTCATTTTTCCAGATGATTGTGGGTTTCCTGGGCTTATGGAGAAACGTTGTCAGGTTGATTAGCCCACTGTCTGCAGTTCCCCTTGTAACTTCCACAGCAGTTGGCCTCTACCATCTTGGTTTTCCGATGCTGGGGAGATGTGTTGAAGTTGGATGTCCAGAGTTGATTTTGATGGTTTTTATCTCACAGGCAAGTACATTACCATTGATGGAGGCCATATATGACCGATATGCAATGTTATTCTCAGTCCCAATTGTATGGTCATATGCACACATTCTGACTGCTAGTGGTGTGTATGATGGCAAACCTCCGAACACCCAGATAAGCTGCCGCACTGATCGTTCTGGACTCGTTGGTGGCAGTCCTTGGATACGAATTCCTAGTCCATTTCAATGGGGGACGCCCACTTTTAATGCAGGAGAAGCTTTTGCAATGATGGCGGCTTCCTTTGTTGCTCTTATTGAGTCCACTGGTACATTTATTGCTACATCAAGATATGGGAGTGCCACTCCCATACCACCATCTGTTATCAGCCGTGGTGCTGGCTGGCTGGGAATAGGAGTTTTGCTAAATGGCTTTTTTGGTGCTGTAACTGGCTCTACCATATCAGTAGAAAATGTTGGGCTATTGGCAGTGACAAGAGTTGGAAGTCGAAGAGTCATTCAAATATCAGCAGGGTTTATGATATTCTTCTCTGTATTAGGAAAATTTGGAGCCGTATTTGCCTCAATACCTTTGCCAATCATAGCAGCTTTGTACTGTGTCTTCTTTGCCTATGTTTTTTCTTCAGGGCTTGGATTTCTCCAGTTCTGTAACCTCAACAGTTTCAGAACAAAGTTCATCCTAGGCTTCTCCATTTTCATGGGCTTTTCAATACCACAGTACTTAGAAGAATATCAACTAAGTTCCAGACCTGGTCATGTCCACACCAATTCTGGACCGTTTAATGACATGATGACTGTCATCTTCATGTCAAACGCGACGGTTGCTGCTATGATTGCTTTGTTATTGGATACCACTCTTTCCTGGGGGAAAGATGGTGGTAGCAACGATAGCGGCTCACATTGGTGGAGAAAGTTCAGTTCATATAATTCAGATGTGAGAAGTGATGAATTTTATGCACTGCCATTCAAACTCAATAAGTTTTTCCCAGCTCATTGA 1596 0.4386 MAGDAAGGGDSAGDLQPHPVLEQLPGIQYCMNSPPPWPEAILLGFQHYLLTLGITVLIPSILVPQMGGGNDEKARAIQTLLFVSGLNTLLQSFFGTRLPNMVVGSYAFLVPATSILLSKRYNKFEDPLERYEQTMRGIQGALIATSFFQMIVGFLGLWRNVVRLISPLSAVPLVTSTAVGLYHLGFPMLGRCVEVGCPELILMVFISQASTLPLMEAIYDRYAMLFSVPIVWSYAHILTASGVYDGKPPNTQISCRTDRSGLVGGSPWIRIPSPFQWGTPTFNAGEAFAMMAASFVALIESTGTFIATSRYGSATPIPPSVISRGAGWLGIGVLLNGFFGAVTGSTISVENVGLLAVTRVGSRRVIQISAGFMIFFSVLGKFGAVFASIPLPIIAALYCVFFAYVFSSGLGFLQFCNLNSFRTKFILGFSIFMGFSIPQYLEEYQLSSRPGHVHTNSGPFNDMMTVIFMSNATVAAMIALLLDTTLSWGKDGGSNDSGSHWWRKFSSYNSDVRSDEFYALPFKLNKFFPAH* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0705 531 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 14 529 - -
Vvi18g0705 531 Pfam Permease family 39 441 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0705 Vvi-Chr18 7474794 7480633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0705 15 530 Organic Solute Cotransporters AT1G60030 63.846 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0705 - - vvi:100253909 1038.87