Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0701 ATGAGTAGTCGCCATGAGGGCAGGACAGCTTCATCTGAAATATTTGAAAATCAGTCCGACTGTGAAGATGAGAGTAAGGTGTGCTCAAAGGCAAGGCAAGGAAAGAAATTGTGGAGGAGAGTGAGATGCCAGCTCGTTGAGTACCACTCATTACCTGGGTATTTGAGGGACAATGAATTCATCTTGGGTCATTACCGATCTGAATGGCCATTGAAGCAAGTAATCCTCAGCATCTTCACCATACACAATGAAACGCTCAATGTTTGGACGCATTTGATTGGTTTCTTCCTTTTCCTGTCGCTAACCATATACACTGCAATGAGGGTTCCAGAGGTTGTGGATCTTCGTTCCTTTCAACATTTGCCAGACTTTCTTAGAAGAGCTGATCTGCACAACATTCGTTGGCATGTTTTAGAACTTCTGTCCAACTGCTTGCCTGAGCGGTTTTCGCCTACCAATCAAACAAGTGATTGTGTTCTGTGTGCAGTGAAAGAAGGTGCAGCAAACTTGATAGCTCCCCTGATGTTCCAGCCAATCACAAGATGGCCCTTTTTTGCCTTCTTAGGCGGTGCAATGTTCTGTTTGCTATCAAGCAGCATATGCCACCTCCTCTCTTGCCACTCAGAGCGCCTTTCCTACATAATGCTCAGACTTGACTATGCAGGCATCGCGGCCCTCATCTCCACCTCCTTCTACCCTCCTGTCTACTACTCATTTATGTGCAACCCCTTCTTTTGCAGGCTCTACTTGGGCTTTATAACAATATTTGGGATTGCCACCATTATTTTCTCTCTCCTTCCAGTTTTCCAGAATCCTGAGTATCGCACTTTTCGTGCTTCTCTCTTCTTTGGGATGGGTGTGTCAGGTGCAGCTCCTATACTTCATAAGCTGATTTTGTACTCGGACCAGCCAGAGGCACTCCAGACCACTGTTTATGAGATAGTAATGGGGGCGTTTTACGGGATTGGAGCATTGATTTATGCAACAAGAATTCCGGAGCGGTGGAAGCCCGGCAGGTTTGATATTGCTGGGCACAGTCACCAGCTTTTTCATGTGCTGGTTGTGGCGGGGGCTTACACCCACTATCATACTGGGCTGGTCTACCTCAAGTGGCGGGACTTGAAAGGCTGCTAG 1134 0.47 MSSRHEGRTASSEIFENQSDCEDESKVCSKARQGKKLWRRVRCQLVEYHSLPGYLRDNEFILGHYRSEWPLKQVILSIFTIHNETLNVWTHLIGFFLFLSLTIYTAMRVPEVVDLRSFQHLPDFLRRADLHNIRWHVLELLSNCLPERFSPTNQTSDCVLCAVKEGAANLIAPLMFQPITRWPFFAFLGGAMFCLLSSSICHLLSCHSERLSYIMLRLDYAGIAALISTSFYPPVYYSFMCNPFFCRLYLGFITIFGIATIIFSLLPVFQNPEYRTFRASLFFGMGVSGAAPILHKLILYSDQPEALQTTVYEIVMGAFYGIGALIYATRIPERWKPGRFDIAGHSHQLFHVLVVAGAYTHYHTGLVYLKWRDLKGC* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0701 377 PANTHER ADIPOR/PROGESTIN RECEPTOR-RELATED 31 373 IPR004254 GO:0016020
Vvi18g0701 377 Pfam Haemolysin-III related 79 362 IPR004254 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0701 Vvi-Chr18 7443936 7446556 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0701 K07297 - vvi:100248829 747.658