Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0689 ATGGAAATGTCATGGTTGGCTCGATCGCTGGCCAACTCTCTCCGTCTAGACGATGACCGTGACGGTGAAGGTGAGGATGATGGTGACGACACAACCATCCCTGAGACCAGAGAAGAAAAGAATACGGAGGAACCAGAGTTGGATCAACACGGCCGAGGCGTCAAAGAAGACCTCACCGAATTCAAACAAACCCTAACTCGTCAGCTGTGGGGCGTCGCCTCGTTTCTTGCTCCTCCTCCTCCTGCACAGTCCTCCGCGCCATCTAATCCTCACGACGTTGAATCAATCTCCGATCTTGAACAATGCGAGCCCTCCGATCAGTCCGTTTCCGGTGAAATTTCCGACGAGGAGACGTTCGATTCCGTTGGTATCCGCGACGATATCGCAGGGATCGGGGGACGATTCAGGCCAGAGATCTCGAATCCATCGAATAATAGAGCGGTTTCAGAGATTTCGGAGATGGATTCGAATTTTCTGCCGTTTCGATCGGACGGCCGGGATTCGGTGGAGGAGTACGATTTCGAGGGCATCCCTGGGATCACCGAGGAGGTTTTGGCTTTCGCGAGGAACATTGCGCATCATCCTGAGACTTGGTTGGATTTTCCTTTGGAGGAGGAAGACGACCTGGATGATTTTGACATGTCCGACGCTCAGGAAGATCATGCTTTGGCCATTGAACATCTTGCACCTAGATTAGCTGCTCTCCGTATTGAACTGTGTCCTAGCCATATGAGCAAGGGCTATTTTTGGAAGATCTATTTTGTTCTCCTGCATTCAAGACTTAATAGACAAGATGCAGAGCTTTTGTCAACACCTCAGATTGTGGCAGCTAGAGCAATGTGGATGCAGGAACTACAAAAGAAAACAAAGCCAGAACCAGACTGGTCCGGAAGAAGCACTTACTATTCAAAAGAGAGCACTAGTTTACATCAGGAGGATTCTGCCTCCACCAATAATTCTCATTCTGAAAACATGCCATTCAGGACATTTGCTTTGGAACCTGTCAGTTTCCCTGTGACAACTGATTTGGAGACTGAGAAGTACACGCTTGCAAATAGCGAATCTCAAATCAGTGATAAGTCTGTCATTGAAGAAAAGCCAGAGGTCAGAACCAAGGATTTTCTCCCTGGTCCATCCTCTAAAGTATTGATTCAGAACTACGAGGATGATGAGGATGATTGGCCGGAGGATGAAATCTTAGAATTAGGTGCCTACAGTAGAACTGTCATCCCCGTGGGACATGAAGAAGATGTATCTTTCAGTGATCTTGAAGATGATGATTGTATTATACCTATAAAATCCAAGTAG 1308 0.474 MEMSWLARSLANSLRLDDDRDGEGEDDGDDTTIPETREEKNTEEPELDQHGRGVKEDLTEFKQTLTRQLWGVASFLAPPPPAQSSAPSNPHDVESISDLEQCEPSDQSVSGEISDEETFDSVGIRDDIAGIGGRFRPEISNPSNNRAVSEISEMDSNFLPFRSDGRDSVEEYDFEGIPGITEEVLAFARNIAHHPETWLDFPLEEEDDLDDFDMSDAQEDHALAIEHLAPRLAALRIELCPSHMSKGYFWKIYFVLLHSRLNRQDAELLSTPQIVAARAMWMQELQKKTKPEPDWSGRSTYYSKESTSLHQEDSASTNNSHSENMPFRTFALEPVSFPVTTDLETEKYTLANSESQISDKSVIEEKPEVRTKDFLPGPSSKVLIQNYEDDEDDWPEDEILELGAYSRTVIPVGHEEDVSFSDLEDDDCIIPIKSK* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0689 435 PANTHER BSD DOMAIN-CONTAINING PROTEIN 3 428 - -
Vvi18g0689 435 MobiDBLite consensus disorder prediction 299 324 - -
Vvi18g0689 435 Pfam BSD domain 209 265 IPR005607 -
Vvi18g0689 435 SUPERFAMILY BSD domain-like 179 265 IPR035925 -
Vvi18g0689 435 MobiDBLite consensus disorder prediction 13 60 - -
Vvi18g0689 435 ProSiteProfiles BSD domain profile. 209 261 IPR005607 -
Vvi18g0689 435 MobiDBLite consensus disorder prediction 75 115 - -
Vvi18g0689 435 MobiDBLite consensus disorder prediction 287 324 - -
Vvi18g0689 435 Gene3D BSD domain 178 271 IPR035925 -
Vvi18g0689 435 SMART wurzfinal6 209 261 IPR005607 -
Vvi18g0689 435 MobiDBLite consensus disorder prediction 33 60 - -
Vvi18g0689 435 MobiDBLite consensus disorder prediction 87 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0689 Vvi-Chr18 7278931 7282588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0689 179 261 EF-hand Containing Proteins AT1G69030 30.108 3.91e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0689 - - vvi:100250545 809.29