Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0683 ATGGAGAAGATCTGTGTAGCAGTTCGGGTGCGGCCTCCTGTCGCCCAGGAAACCTCAAGCTCTACCTACTGGAGAGTCGAAGACAATCGCATTTCTCTCCACAAAACTCTCGGAACTCCCATCTCTGGTGTTTCTCACGCTTTCGACCATGTGTTCGACCAAAGTTGCGCCAATGCTAGGGTTTACGAGCTTCTTATTAAGGATATCATCCATGCCGCTGTGGAGGGTTTTAACGGAACTGCATTTGCCTATGGACAGACCAGCAGTGGCAAGACTTACACCATGAATGGCTCTGAATCTGATCCAGGAATCATTCATCTGGCTGTCAAAGATGTATTTAGAAGAATTCAGATGACAGCTGATCGAGAGTTTCTGATTCGAGTTTCCTACATGGAAATTTATAATGAAGAAATCAATGATCTTCTTGCAGTAGAGAACCAGAAATTACAAATTCACGAGAGTCTGGAGAACGGCGTATTTGTTGCAGGCCTTAGGGAAGAAATTGTAAATGGTGCTGAGCAAGTGCTAAAGATCATTGAATCTGGAGAAGTTAATAGGCATTTCGGTGAGACAAACATGAATGCTCGAAGTAGTAGGTCTCACACCATATTTAGAATGGTTATTGAAAGCAAGGAAAAGGATTCCAATTATTCCAGTGATTATTCAAGTACAGATGCAGTCCGTGTCTCGGTTTTGAACTTGGTAGATTTAGCTGGGTCTGAACGAATTGCAAAAACTGGAGCAGGTGGAGTTCGTTTAAAGGAAGGAAAGCACATTAACAAGAGCTTAATGGTTCTTGGTAATGTAATTAACAAATTGAGTGATGGTGCAAAGCAAAGGGGACATATTCCTTATCGAGATAGTAAGCTAACTCGCATACTTCAACCTGCACTTGGTGGTAATGCCAAAACTTCTATAATTTGCACTGTAGCACCAGAAGAGGTTCACATTGAGGAAACCAAGGGAACCCTCCAGTTTGCTAGCAGAGCCAAGCGCATTACCAATTGTGCTCAAGTGAATGAGATTTTGACAGATGCAGCATTACTGAAGCGGCAAAAACTAGAGATAGAGGAACTACGTAAAAAACTTCAGGGATCCCATGCTGAGGTGCTAGAGCAAGAGATTTTGAAACTTCGAAATGATATGCTCAAGTATGAACTGGAGCATGAGAAGCTTGCAACAGAACTGGAAGAGGAGAGGAAATCCCACAAAGAACGAGATCAATGGATTAGGGAACAGCAGATGAAAATTGACAATCTCAGTAGTCTAGTCACTTTGTCAGATTGCGATAGGAAATCTAGTCAGGACTCTGCAAGACAAAGCCTTAAGGAAGAATCCATTGACAGTCATAGTACAGGTCATGGAGATGGTTTTAGTACTCCTTGTTTTAAGGCAGTTCCCAATGCCTTTGTTGTCAAACGATCAAATTATTCTAGGCTACCTGATTACAGCCCTCTTCCAGATGCTATTAGCAATGTGGCTGATGAAGATACATGGCTGAAGATGAACAAAGGTTATGTTGCTGACCTGGATTCACTTCAAATAACTCCAGCAAGAAGAGTCCAATCCTTTCCAACAAGTGAGGCAACCCCTGGTTGCTCAAAAGAAAATTACAAACAAGAGGTTCAAGTTCTCAAGAGACAATTAGAACTTGCCATTGAAGAGAAAGATCAACTTGAGAGAAACCACATGGAACAAATACTATTGAACAAGCAATTAACAGGGGAAATATCTGAACTTCAAAGAGAAGCACAACTAATTCGAGAAATTCCTCATAGGTTGTGTGAGTCTGTGGCAAATTGCAAAGAAATATATAAGGATGTTATGTCAATCATGCAGAGTTTTGTACCTGATGATGAATCTTCAACTTCAAAATTGCTTTCTAGCACAAGTGAGATTGGTACAACTCTTCTCTCAACTTTGGAAAATCATTTCTCTGTGAGCATTGATGGCAATAGGACTTTTCCTGGGAACAACTCTCTTATTCAAGAACAATGCAAAGTGCTTTGTGAGAGGTTGAACAAAACAATTACATCCTTAGTACTTTCAGAACCATCAACTGTCAAACCTAGACACTCCAGGAATCTACCATGCAGCTGTGGATATAAGGGCTGTGCTTTGGGAGGAGAAACTGCTTGTTGGAAGGAGAAACTGGACAATGAGCTCAATACAATCAATGAAAAATATCAGAGCTTGGAGAAAGAGTTAGAACACAGTAACCAGCTTCTGGAGGTTTCTAAAGAAAGATACCATAGTTTGGAAAGAGAGTTCCATCTTTTGAAAGATGAAAGAGACTCCCTGCTGCAAACAGTGTCCAAGTCAACCCAAAAACTTGCATTGGTGACTGACCAGAAGGAAAATGTTTCGAAGGAATTGAATACTGAATTACAGAGAAGAAAAGATCTTGAAGAAGAGGTCAAACAGTTCAGTGTTGCTTTTGCCCATCGACAGAGATCACTGATGTCTTTCCACAGTCAGTTTAAGTCTAAAATTGAGAACTTGAGAGGCCAGAATCCAGTTCCAATTGCCAAATCTCTTGGCTATTGA 2547 0.4099 MEKICVAVRVRPPVAQETSSSTYWRVEDNRISLHKTLGTPISGVSHAFDHVFDQSCANARVYELLIKDIIHAAVEGFNGTAFAYGQTSSGKTYTMNGSESDPGIIHLAVKDVFRRIQMTADREFLIRVSYMEIYNEEINDLLAVENQKLQIHESLENGVFVAGLREEIVNGAEQVLKIIESGEVNRHFGETNMNARSSRSHTIFRMVIESKEKDSNYSSDYSSTDAVRVSVLNLVDLAGSERIAKTGAGGVRLKEGKHINKSLMVLGNVINKLSDGAKQRGHIPYRDSKLTRILQPALGGNAKTSIICTVAPEEVHIEETKGTLQFASRAKRITNCAQVNEILTDAALLKRQKLEIEELRKKLQGSHAEVLEQEILKLRNDMLKYELEHEKLATELEEERKSHKERDQWIREQQMKIDNLSSLVTLSDCDRKSSQDSARQSLKEESIDSHSTGHGDGFSTPCFKAVPNAFVVKRSNYSRLPDYSPLPDAISNVADEDTWLKMNKGYVADLDSLQITPARRVQSFPTSEATPGCSKENYKQEVQVLKRQLELAIEEKDQLERNHMEQILLNKQLTGEISELQREAQLIREIPHRLCESVANCKEIYKDVMSIMQSFVPDDESSTSKLLSSTSEIGTTLLSTLENHFSVSIDGNRTFPGNNSLIQEQCKVLCERLNKTITSLVLSEPSTVKPRHSRNLPCSCGYKGCALGGETACWKEKLDNELNTINEKYQSLEKELEHSNQLLEVSKERYHSLEREFHLLKDERDSLLQTVSKSTQKLALVTDQKENVSKELNTELQRRKDLEEEVKQFSVAFAHRQRSLMSFHSQFKSKIENLRGQNPVPIAKSLGY* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0683 848 MobiDBLite consensus disorder prediction 431 457 - -
Vvi18g0683 848 Coils Coil 535 562 - -
Vvi18g0683 848 CDD KISc_CENP_E 3 333 - -
Vvi18g0683 848 PRINTS Kinesin heavy chain signature 231 249 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0683 848 PRINTS Kinesin heavy chain signature 283 304 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0683 848 PRINTS Kinesin heavy chain signature 191 208 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0683 848 PRINTS Kinesin heavy chain signature 76 97 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0683 848 Gene3D Kinesin motor domain 1 365 IPR036961 -
Vvi18g0683 848 Pfam Kinesin motor domain 9 333 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0683 848 ProSiteProfiles Kinesin motor domain profile. 3 333 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0683 848 MobiDBLite consensus disorder prediction 432 451 - -
Vvi18g0683 848 ProSitePatterns Kinesin motor domain signature. 230 241 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vvi18g0683 848 FunFam Centromere-associated protein E 1 364 - -
Vvi18g0683 848 Coils Coil 349 406 - -
Vvi18g0683 848 Coils Coil 570 590 - -
Vvi18g0683 848 PANTHER CENTROMERE PROTEIN E 2 834 IPR027640 GO:0003777|GO:0007018
Vvi18g0683 848 SMART kinesin_4 1 341 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0683 848 Coils Coil 785 812 - -
Vvi18g0683 848 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 365 IPR027417 -
Vvi18g0683 848 Coils Coil 715 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0683 Vvi-Chr18 7156842 7166217 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0683 2 382 Miscellaneous Gene Families AT2G21380 45.478 1.34e-90 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0683 K11498 - vvi:100254027 1626.3