Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0682 ATGCCTTCCACCATGTCCAAACCAGGTAAACAGCTAGGACAACTTCTCCAGGAGCAACAAGAGCCCTTTATCCTGGAGACTTACCTTCTGGAGAGAGGGTGCCTGAAAAAGAACTTGACTTCAGAGGGTGGCTTCAGCTGTTGTCATGGCAACTCAAGCAAGCTTTTGAAGAGGTCAGCTAGCTGCGATCTAAACATGAGCGGAAAGGGTATTCCACAATGTTCCAAAATTTTGAGAGCTATATTTAACAAGCTTGTCTCAATTACTGGCAACCCAAAAAGCAAACTTTGTGATCATGATGGAGGTGTATTGAGTTTTTCCGAAGTGGGAAGCAGCAGCCAAAAAGTTGCGGAACAGGATAGTTTTTCCTCTGCTAGCACCACTACTGTGTTTAATTCCTGCTCCGCGAGTGACTCAGAAGACTCATGTGCTTCACTGCAAATCCACGACCCCTTCTCTACTGCAACAACCATTCAAGCTTTGAAGCAAAACAAACCGAGAGAAGAAGAGGCTGCTACAGATAGACAGGTTCAGGGGAGATCCAAGAACCAAAGGCTACAATTCGGGCCAATTTCTTTTCTAGGAGATTCCTCAATTGGGCTGTCCAATGCAAAAACAAGGAAACAAGAGAATTCATCCACTAGGAAATCTGGCTTCTCCAACAGAGTTATACAAGACTCGGTGTCGTCAGCCTCTCTCCTGGAAGTATTGGTCCAATCCCCAACAGAAAAGCCAAGATATAGCGGGGTTACAGAATTGCAAGAGCTTGTCTGGTCAAACTCTTCCTCCCGGTGCTTCAAATCCAAAAGGGTTTTGCTGCAAAGAAAGAAGCTTCTGTTTGATTGTGTGAGGGAAGTGGTAGAGGGCCATGGAAGAAATGAGAGAAGGGAGCAGAGTATTGGGGAATTCCTTGGGCCTGAAGAGCTTGAGCAGCTCATCTGTCAGAAAATAAGGGCATGGGAAAGACAATCTGGAAAGGAAACAAACATAAACCATCTGCTAAACTTTGATTTCATAGCTTCATCACAAGAATGGAATGATTTGAGGCCAGAGAGCAGGGAACTTGGGCTGGATTTTGGAGAAGCCATTTTAGAAGAGATGATGAGTGAGATAGTGACCGACATGATGAATATTATATGA 1140 0.4465 MPSTMSKPGKQLGQLLQEQQEPFILETYLLERGCLKKNLTSEGGFSCCHGNSSKLLKRSASCDLNMSGKGIPQCSKILRAIFNKLVSITGNPKSKLCDHDGGVLSFSEVGSSSQKVAEQDSFSSASTTTVFNSCSASDSEDSCASLQIHDPFSTATTIQALKQNKPREEEAATDRQVQGRSKNQRLQFGPISFLGDSSIGLSNAKTRKQENSSTRKSGFSNRVIQDSVSSASLLEVLVQSPTEKPRYSGVTELQELVWSNSSSRCFKSKRVLLQRKKLLFDCVREVVEGHGRNERREQSIGEFLGPEELEQLICQKIRAWERQSGKETNINHLLNFDFIASSQEWNDLRPESRELGLDFGEAILEEMMSEIVTDMMNII* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0682 379 PANTHER DUF4378 DOMAIN PROTEIN 1 378 - -
Vvi18g0682 379 MobiDBLite consensus disorder prediction 162 182 - -
Vvi18g0682 379 Pfam Domain of unknown function (DUF4378) 270 370 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0682 Vvi-Chr18 7151270 7152605 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0682 - - vvi:104882515 721.079