Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0671 ATGGCGCCATCCTTTGACTGGTGGACAAAGGAGAGTCACAGGGGGACGCCGGTTGTCGTCAAGATGGAGAACCCTAACTGGTCCATTGCGGAGCTGGAGGGCCCGTCGGATGACGATTTTCTTCTCGCCGGTTCGCCCAACACCAACAGGGACAAAGGCCGGGGCAAAAACGCCAGGCAGCTCACATGGGTTCTTCTCCTCAAAGCCCACAAGGCCGCCGGTTGTCTGACCTCCATTGCGTCGGCAATGTTCGGCCTCGCTGCCGCCGTGCGCCGCCGAGTCGCTTCCGGAAGGACCGATACCGATAACGACAACGGCGGAGGCATGGAGCAGGAGAACCCAACGGTGAAAAGCCGGTTCTATTCGTGTATAAAGGTGTTTCTGTGGTTATCTGTTGTGTTGCTGGTATTTGAGGTGGCAGCCTACTTCAAGGGTTGGCATTTCGGCGCACCCCATCTTCAATTGCAGTATTTATTGACAGCTCCATATGGGGTTAAGGATATCTTCAATTCCTTATATTCTCGATGGGTTTTGATTCGGGTGGAGTACCTCGCTCCTCCTCTGCAATTCCTTGCCAATGCTTGTATAGTGCTTTTCCTTATACAGAGTGTGGATAGGCTAGTTCTTTGTTTGGGGTGTTTCTGGATCAAATTCAAGAAGATTAAACCGGTTCCTAAGGGGACTGTGGATCTTGAATCCGGTGATGGAAATGGTTACTTTCCCAGGGTTCTTGTTCAGATCCCCATGTGCAATGAAAAAGAGGTTTATCAGCAATCTATTGCAGCCTGCTGCAATTTGGACTGGCCAAAATCAAGCATACTAATCCAAGTTCTGGACGATTCAGATGACCCAGTGACACAGTTGATGATCAAAGAGGAGGTCACAAAATGGCAGCAAGAGGGCGCCCACATTTTGTACAGGCACCGGGTGATCAGAGACGGGTACAAGGCTGGTAATCTCAAGTCTGCTATGAATTGCAGTTATGTCAAGGACTATGAATTTGTGGCAATATTTGATGCAGATTTTCAGCCCACCCCTGATTTTCTGAAAAGAACAGTTCCACATTTCAAGGACAATGAAGAACTAGGGCTGGTTCAGGCAAGGTGGTCTTTTGTGAATAAGGATGAGAACCTTCTAACTAGGTTACAGAACATTAACTTGTCTTTTCATTTCGAAGTGGAGCAGCAAGTTAATGGAGTTTTCATCAATTTCTTTGGTTTCAACGGCACTGCTGGAGTGTGGAGGATAAAGGCATTAGAGGATTCTGGTGGTTGGTTGGAGAGGACCACTGTTGAGGACATGGATATTGCTGTTCGAGCTCATCTTCAGGGCTGGAAATTCATCTTCCTCAATGATGTGGAGTGCCAATGTGAACTGCCAGAGTCTTATGAAGCTTATAGGAAACAACAACACAGATGGCATTCTGGACCCATGCAGTTGTTTCGCCTATGTTTGCCTGATGTTATCCGATCCAAGATCAGTATTTGGAAGAAGGCAAATCTAATCTTCCTCTTCTTTCTCCTCAGAAAACTGATACTACCCTTCTATTCTTTCACCCTGTTCTGCATAATTCTCCCAATGACAATGTTCATCCCTGAGGCTGAGCTCCCATCATGGGTTGTATGTTACATTCCGGCAACTATGTCATTTCTCAACATCCTCCCTTCTCCAAAATCCTTCCCCTTCATTGTCCCCTATCTTCTCTTTGAGAACACCATGTCAGTGACCAAGTTCAATGCAATGATCTCAGGCCTATTCCAGCTGGGAAGTGCATATGAATGGGTTGTCACAAAGAAATCTGGACGCTCCTCTGAGGGTGATCTTGTCTCCCTAGTTGCAAAAGGCCCGAAGCATCAAAGGGGAAGCTCAGAGCCTAATATTGGGGAGATGGAGGAAACTTTACTGCAGGAACAAAAGGCCTCTAGGAAGAAAAAGCACAACAGGATTTATACAAAGGAGCTGGCATTGGCTTTCCTTCTTCTAACAGCTTCAGCAAGGAGCCTCCTCTCTGCTCAGGGGATCCACTTCTACTTCCTGCTATTTCAGGGCATATCATTTCTTCTGGTTGGTTTAGACTTGATTGGAGAGCAGGTTGAGTAA 2100 0.471 MAPSFDWWTKESHRGTPVVVKMENPNWSIAELEGPSDDDFLLAGSPNTNRDKGRGKNARQLTWVLLLKAHKAAGCLTSIASAMFGLAAAVRRRVASGRTDTDNDNGGGMEQENPTVKSRFYSCIKVFLWLSVVLLVFEVAAYFKGWHFGAPHLQLQYLLTAPYGVKDIFNSLYSRWVLIRVEYLAPPLQFLANACIVLFLIQSVDRLVLCLGCFWIKFKKIKPVPKGTVDLESGDGNGYFPRVLVQIPMCNEKEVYQQSIAACCNLDWPKSSILIQVLDDSDDPVTQLMIKEEVTKWQQEGAHILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQNINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEDSGGWLERTTVEDMDIAVRAHLQGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDVIRSKISIWKKANLIFLFFLLRKLILPFYSFTLFCIILPMTMFIPEAELPSWVVCYIPATMSFLNILPSPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVAKGPKHQRGSSEPNIGEMEETLLQEQKASRKKKHNRIYTKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVE* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0671 699 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 236 458 IPR029044 -
Vvi18g0671 699 SUPERFAMILY Nucleotide-diphospho-sugar transferases 243 522 IPR029044 -
Vvi18g0671 699 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 174 696 - -
Vvi18g0671 699 FunFam probable xyloglucan glycosyltransferase 5 235 459 - -
Vvi18g0671 699 Pfam Glycosyl transferase family group 2 335 531 IPR001173 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0671 Vvi-Chr18 7027545 7030360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0671 1 699 Miscellaneous Gene Families AT4G07960 78.230 0.0 1096
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0671 - - vvi:100242055 1373.61