Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0667 ATGTCGGAGGGCAAGAATATGAGAGAAGATGATAATGAGAAAGGGAGTGACAATAATCCATGGGCGCGGTCAAACGGACAGTATGAGGAAAAAGGCGAAGGCATGCGACTTTGGGGAATTTTCCTCTTCAGTTTGATTGGAGCCACCGTCACCACTTTCGCCGTTGGGCAGTTTCGTAGAACAGCTGGTTGGTTCTATACTCAGTTTGCTAGGTCACAATCATCAAGGAATGGTGCAACTGGTAGTTCTTTTCGGTCAAGTTTTCAGGAGGAAGCATGGAAAAGATATAATCGTCGAATGCAAGAGGAATATGAAGAAGAAATGGAGAGAGTGGAGCGTATAAAGCGTATGCAGAGTGTATTCAACCGAGAGAGGAATAAATACAAGAGAAGCTACGAGAGTTGGCGTGAAAATGGTGAAGGTCCATATCATCAACATTTCCAGAGGGATGACTGGTATTGGAAAACTGATACATCCTACAAATATCAAAGGGCTAATGCCAGGGAAATTCCTAGAGACAGAACCAGTGCAAGTTATCCACTATCCCATCACTATTTAACTTTGGGTCTTGACAGGACAAGAGCAAAACCATATACAGAAGCTGAAATTAAGAATGCATTCAGAGCAAAGGCAATGGAGTTCCACCCAGACCAGAACCAAGATAATAAAGAGGCTGCTGAAGCGAAGTTTAAAGAGGTGATGACGTCCTATGAGGCTATTAAGTTGGAAAGAAAGAACGGGAGTTCATAA 750 0.4307 MSEGKNMREDDNEKGSDNNPWARSNGQYEEKGEGMRLWGIFLFSLIGATVTTFAVGQFRRTAGWFYTQFARSQSSRNGATGSSFRSSFQEEAWKRYNRRMQEEYEEEMERVERIKRMQSVFNRERNKYKRSYESWRENGEGPYHQHFQRDDWYWKTDTSYKYQRANAREIPRDRTSASYPLSHHYLTLGLDRTRAKPYTEAEIKNAFRAKAMEFHPDQNQDNKEAAEAKFKEVMTSYEAIKLERKNGSS* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0667 249 Pfam DnaJ domain 184 244 IPR001623 -
Vvi18g0667 249 Coils Coil 97 117 - -
Vvi18g0667 249 MobiDBLite consensus disorder prediction 1 26 - -
Vvi18g0667 249 Gene3D DnaJ domain 179 247 IPR036869 -
Vvi18g0667 249 MobiDBLite consensus disorder prediction 1 17 - -
Vvi18g0667 249 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 11 247 - -
Vvi18g0667 249 ProSiteProfiles dnaJ domain profile. 183 245 IPR001623 -
Vvi18g0667 249 SMART dnaj_3 182 245 IPR001623 -
Vvi18g0667 249 SUPERFAMILY Chaperone J-domain 179 241 IPR036869 -
Vvi18g0667 249 CDD DnaJ 184 238 IPR001623 -
Vvi18g0667 249 PRINTS DnaJ domain signature 207 222 IPR001623 -
Vvi18g0667 249 PRINTS DnaJ domain signature 225 245 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0667 Vvi-Chr18 6978959 6992471 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0667 - - vvi:100248937 506.908