Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0665 ATGTTGTCCAGGAAAGCGAGGCTCGATGCACATGGGGAAGACTCTTCCTACTTCCTAGGGTGGAAAGAGTACGAGAAGAATGCGTATGATGACGTTCAAAATCCAACTGGGATCATTCAGATGGGTCTAGCCGAGAACCAACTCTCCTTCGACCTTCTTGAGTCATGGCTAGCAAGTAACCAGGATGCAGCTAGGTTGACAAAAAACGGGGAATCCGTGTTTCGAGAACTGGCTCTCTTCCAAGATTATCATGGTTTACCCGATTTCAAGAATGAGCTGGTGGAGTTCATGGCAGAAATAAGAGGAAACAAAGTAAATTTTGATCCCAGAAAACTTGTTCTGATGGCTGGGGCTACCTCAGCCAATGAGACGTTAATGTTTTGCATTGCCGAATCTGGCGATGCTTTCCTCCTTCCCACTCCATACTACCCTGGGTTTGATAGGGATCTTAAATGGAGAACAGGAGTTGAACTCGTTCCAATACATTGCTCGAGTTCGAATGGCTTCAAAGTTACCAAATGTGCACTGGAAGAAGCTTATCAACAAGCCCACAAACTCAGCTTAAATGTTAAAGGAGTACTGATCACCAATCCTTCAAACCCGTTGGGCACCACAATGGGCCGTGACGAGCTCAACGACCTCATCGATTTCGCTGTTGCCAAAAAAATCCATATAATAAGTGATGAAATTTATTCAGGAACGGTGTTCGACCATCCCAGTTTCATAAGCATCATGGAAGCTCTTATGGACAGAAAGCTTCAAGACACCGACCTCTGGAGCCGCGTTCACATTGTTTACAGTCTCTCGAAGGATCTAGGCCTTCCTGGATTTAGGGTCGGAATGATTTATTCCAACAATGAAACAGTAGTATCAGCAGCGACCAAAATGTCAAGCTTCGGCCTCATTTCTTCCCAAACTCAGTATTTACTCTCGAAAATTCTGTCGGACAAAAAGTTCACCAGGAATTACCTGAAAGAGAATCGCAAGAGACTTAAAACGAGGCGGGAAATGATTGTTGCGGCCCTGCGAAACGCGGGAATTGGGTGTTTGAAGAGCAATGCCGGGCTGTTCTGCTGGGTGGACATGAGGCACCTTCTGAGCTCTAACACATTTGACGCGGAAATGGAGCTTTGGAAGAGGATTCTACGTGAAGCTGGGTTGAACATCTCTCCAGGAGCGTCTTGCCATTGCAGCGAACCAGGGTGGTTTAGAATATGCTTCGCAAACATGTCTGAAGACACCTTAAACCTATCGATGCAGCGGATCAAGGCCTTGGCAGAGAGAATCCAGCAGTGCAGGCGAGGTCGTGTGACCCATCAAGATTCAGGCTGTAACTCAAGAAGAAGGTCATTCTCCAAGTGGGTTCTCAATCTCTGTTCCTATGATCGTGAACCGGATCGTTGA 1404 0.4651 MLSRKARLDAHGEDSSYFLGWKEYEKNAYDDVQNPTGIIQMGLAENQLSFDLLESWLASNQDAARLTKNGESVFRELALFQDYHGLPDFKNELVEFMAEIRGNKVNFDPRKLVLMAGATSANETLMFCIAESGDAFLLPTPYYPGFDRDLKWRTGVELVPIHCSSSNGFKVTKCALEEAYQQAHKLSLNVKGVLITNPSNPLGTTMGRDELNDLIDFAVAKKIHIISDEIYSGTVFDHPSFISIMEALMDRKLQDTDLWSRVHIVYSLSKDLGLPGFRVGMIYSNNETVVSAATKMSSFGLISSQTQYLLSKILSDKKFTRNYLKENRKRLKTRREMIVAALRNAGIGCLKSNAGLFCWVDMRHLLSSNTFDAEMELWKRILREAGLNISPGASCHCSEPGWFRICFANMSEDTLNLSMQRIKALAERIQQCRRGRVTHQDSGCNSRRRSFSKWVLNLCSYDREPDR* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0665 467 FunFam 1-aminocyclopropane-1-carboxylate synthase 2 291 421 - -
Vvi18g0665 467 FunFam 1-aminocyclopropane-1-carboxylate synthase 3 61 316 - -
Vvi18g0665 467 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 3 424 - -
Vvi18g0665 467 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 133 154 - -
Vvi18g0665 467 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 261 285 - -
Vvi18g0665 467 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 74 90 - -
Vvi18g0665 467 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 41 67 - -
Vvi18g0665 467 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 111 131 - -
Vvi18g0665 467 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 187 211 - -
Vvi18g0665 467 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 223 246 - -
Vvi18g0665 467 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 293 316 - -
Vvi18g0665 467 CDD AAT_like 75 424 - -
Vvi18g0665 467 Pfam Aminotransferase class I and II 39 421 IPR004839 GO:0009058|GO:0030170
Vvi18g0665 467 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 267 280 IPR004838 GO:0003824|GO:0009058|GO:0030170
Vvi18g0665 467 Gene3D - 61 316 IPR015421 GO:0003824
Vvi18g0665 467 SUPERFAMILY PLP-dependent transferases 1 425 IPR015424 -
Vvi18g0665 467 Gene3D Aspartate Aminotransferase, domain 1 27 421 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0665 Vvi-Chr18 6960144 6962232 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0665 K01762 - vvi:100250639 946.036