Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0645 ATGGATCCCTGTCCTTTCGTGCGCCTTCTCGTCGGGAATCTTGCTCTCAAGGTTCCGGTTGCCTCCAAACCTGCTCGCTCCGTCGTGCATCCTTCTTCCTCCCCTTGCTTCTGCAAAATAAAACTAAAGAACTTTCCTCTTCAAACCGCTGTCGTCCCCTTCATTCCTCCGGAGAATCAGTTCCCGGACGGTCAGGTCCAAACTCTAGCTGCCAGCTTTCATTTGAGCAAGGCCGATCTGGAGAAACTCGCCGCCAAATCCATCTTCGCGGGGAAACTTTGCCTGAAGATTGCGGTATACACTGGGCGGAGAGGGACTACTTGCGGTGTAAATTCTGGGAGACTATTGGGGAGAGTTACAGTTCCGTTGGATCTGGCGGGAACAGAAACTAGGCCTTGTGTGTTTCACAATGGGTGGATTTCGGTTGGAAAGGGCACCAAGGGTTCGTCTGCGCAGTTCCATTTGAATGTAAAATCCGAGCCCGATCCCAGATTCGTATTTCAGTTCGATGGAGAACCCGAATGCAACCCACAAGTCTTTCAGATTCAAGGGAGCATTCGACAACCCGTGTTTACTTGCAAGTTCAGTTTCAGGAACACCGGAGGCCCAAATCAGAGATCCAGATCATTACAGTCCGAAACCATTAGTTCAAGGACCTGGTTGAGTTCATTCGGCAGCGAGAGGGAAAGGCCCGGAAGGGAGCGTAAGGGATGGTCCATCACGGTTCACGACCTCTCTGGCTCTCCAGTAGCCGCTGCTTCAATGGTTACACCCTTTGTAGCCTCACCTGGTTCTGACCGAGTCAGCCGATCGAACCCTGGTTCTTGGCTCATTCTGCGTCCCGGGGATGGAACATGGAAGCCCTGGGGACGCCTTGAGGCCTGGCGCGAGCGAGGTTCCAGTGACGGGCTGGGTTACAGGTTCGAATTAATTCCAGATACTAATGGAGGAATGGGTGCGGCAGGCATAGTTTTATCGGAGTCTACTCTTGGTAGCAACAAGGGCGGGAAATTCGTAATAGACTTGGGCGGTGGGAGCAACGGACGTGCGACTCCTGGTAGCGCAACGTCGCCGGCTTGCAGCCCTAGAAGCAGCGGAGATTTCGGGTACGGGTTGTGGCCATACTGCAGCTACAGAGGGTTTGTGATGTCTGCGACGGTTGAAGGTGAGGGAAAATGCAGTAAGCCATCAGTGGAGATCAGTGTGCAGCACGTGAACTGCACAGAAGATGCAGCTGCATTCGTGGCGCTGGCCGCAGCCGTTGATCTTAGCATGGATGCTTGCAGGCTTTTCTCTCACAAGCTCAGAAAGGAGTTGTGCCAGCACCAGGATTTGCTAGGCTGA 1344 0.5342 MDPCPFVRLLVGNLALKVPVASKPARSVVHPSSSPCFCKIKLKNFPLQTAVVPFIPPENQFPDGQVQTLAASFHLSKADLEKLAAKSIFAGKLCLKIAVYTGRRGTTCGVNSGRLLGRVTVPLDLAGTETRPCVFHNGWISVGKGTKGSSAQFHLNVKSEPDPRFVFQFDGEPECNPQVFQIQGSIRQPVFTCKFSFRNTGGPNQRSRSLQSETISSRTWLSSFGSERERPGRERKGWSITVHDLSGSPVAAASMVTPFVASPGSDRVSRSNPGSWLILRPGDGTWKPWGRLEAWRERGSSDGLGYRFELIPDTNGGMGAAGIVLSESTLGSNKGGKFVIDLGGGSNGRATPGSATSPACSPRSSGDFGYGLWPYCSYRGFVMSATVEGEGKCSKPSVEISVQHVNCTEDAAAFVALAAAVDLSMDACRLFSHKLRKELCQHQDLLG* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0645 447 PANTHER OS08G0163500 PROTEIN 1 443 IPR010410 -
Vvi18g0645 447 Pfam Protein of unknown function (DUF1005) 1 440 IPR010410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0645 Vvi-Chr18 6826957 6828955 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0645 - - vvi:100245533 914.835