Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0640 ATGGCTGGGAACTTGAGCACGAATACCTTGTTCGTAGAACAAGCCCCAGAAACAATTGAGAAGGGAGATATAGGCAAGAACTTGGACGACGATGGACGCTTCAAAAGAACAGGAACACTCCTAACTGCAAGTGCCCATATCATAACTGCTGTGATTGGGTCTGGAGTGCTGTCTCTCGCATGGTCCATATCTCAGTTGGGTTGGATAGCTGGGCCAGTTGTTCTCGTGGTGTTCTCTTTCATTACCTATTTCACTTCCACTCTACTTGCCGATTGTTATAGGTCGCCTGATCCAATCACTGGGAAGAGAAACTACACCTACATGGATGTTGTGAGAGCCAACTTAGGAGGTATGAAGGTTCAGCTGTGTGGGATCGCTCAATATGGAAATCTCATAGGGGTCACGATCGGATACACAATCACGGCTTCTATCAGTATGGTTGCCGTACGACGGTCAAACTGTTACCACAAGCACGGCCATCAGGCGAAGTGCAACCCGTCAGACTACCCTTACATGATCATCTTCGCCTGCATCCAGATCGTTCTGAGCCAAATACCAAACTTTCACAAGCTGTCATGGCTCTCTATTCTCGCAGCTGTCATGTCTTTCAGTTATGCCTCTATAGGCATCGGACTCTCCATTGCCAGGGTTGCAGGAGGGGCGCATGCAAGGACAACGTTAACAGGAAGGACAGTTGGAGTGGACTTGTCAAGCTCAGAGAAGGTTTGGAGAACCTTCGAGTCCATCGGAAATATTGCTTTTGCTTACGCATACTCCACCGTCCTCGTCGAGATACAGGACACGCTAAAATCAAGCCCCCCGGAGAACAAAGTGATGAAGAAAGCTACTTTTGCGGGCATCTCAACCACCAGCCTATTCTATGTCCTATGCGGTTGTGTTGGTTATGCAGCGTTCGGGAATGATGCACCAGGAAATTTCCTCACCGGATTTGGTTTCTTCGAACCCTTTTGGTTAATTGACCTTGCTAATGTGTTCATCGCAATCCATCTAATTGGGGCTTACCAGGTTTTCTGTCAGCCTGTATTCGGATTTGTGGAGAAGTGGTGCAACAAGCGTTGGCCTGAAAGCAAATTCATCACAACAGAACACTGCATTGATGTTCCGCTATACGGCATCTACTATCTGAACCTCTTCAGGCTGGTGTGGAGAACAGTATATGTTATAGTTACAGCAGTACTAGCCATGTTATTCCCATTTTTCAATGAAGTCATGGGCTTCCTGGGGGCCGCTTCATTTTGGCCATTGACAGTATACTTCCCTATTGAGATGCACATTGCAAGAACCAAAATTCCCAAATTTTCTTTCACATGGACATGGCTGAAAATATTGAGTTGGACTTGCTTGATGGTGTCAGTTGTTGCTGCTGCTGGATCTATTCAAGGCCTGATCAAGGAAATAGAGAAATACAAGCCTTTCCAAACTCAGGAATGA 1452 0.4649 MAGNLSTNTLFVEQAPETIEKGDIGKNLDDDGRFKRTGTLLTASAHIITAVIGSGVLSLAWSISQLGWIAGPVVLVVFSFITYFTSTLLADCYRSPDPITGKRNYTYMDVVRANLGGMKVQLCGIAQYGNLIGVTIGYTITASISMVAVRRSNCYHKHGHQAKCNPSDYPYMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFSYASIGIGLSIARVAGGAHARTTLTGRTVGVDLSSSEKVWRTFESIGNIAFAYAYSTVLVEIQDTLKSSPPENKVMKKATFAGISTTSLFYVLCGCVGYAAFGNDAPGNFLTGFGFFEPFWLIDLANVFIAIHLIGAYQVFCQPVFGFVEKWCNKRWPESKFITTEHCIDVPLYGIYYLNLFRLVWRTVYVIVTAVLAMLFPFFNEVMGFLGAASFWPLTVYFPIEMHIARTKIPKFSFTWTWLKILSWTCLMVSVVAAAGSIQGLIKEIEKYKPFQTQE* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0640 483 PANTHER OS05G0424000 PROTEIN-RELATED 41 466 - -
Vvi18g0640 483 Pfam Transmembrane amino acid transporter protein 37 470 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0640 Vvi-Chr18 6771575 6774880 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0640 8 480 Organic Solute Cotransporters AT5G49630 75.158 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0640 K24917 - vvi:100257555 983.786