Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0633 ATGGAAGGGTGCATGCACGGTGACCTAGATAATGTGTACTCAACTCTCCGGTATCTGGAGGAGGTTGAGAACACCAAAATCGATCTTCTCATTTGCTGCGGTGACTTTCAGGCTGTTAGGAACAAAAAGGATTTGGAGAGTCTAAATGTGCCACCAAAATACAGGAGCATGAACTCTTTCTGGAAGTATTACTCAGGACAAGAAGTTGCCCCATTTCCAACTATATTCATTGGTGGGAATCATGAAGCATCCAATTACCTGTGGGAATTGTACTATGGAGGATGGGCAGCGCCTAACATATACTTCTTGGGGTTTGCTGGAGTAGTCAAGTTTGGAAATATTCGTATTGGTGGGCTCTCTGGAATTTATAATGAACGTCATTATCATTTAGGACACTATGAGCGACCACCTTATAATGAAAGGGATATCCGGTCTGTATATCATGTTCGTGAATATGATGTCCATAAGCTTATGCAAGTTGAAGAACCGATTGATATCTTTCTTTCACATGATTGGCCTTGTGGCATCACTGACCATGGGAACTGGAAGGAACTTGTTCGATACAAACCTTTTTTTGAGAAAGAGATCCAGGAAAGAACTTTGGGAAGCAAGGCTGCTGCAGAACTGCTGGAAAAACTGAAACCTTCCTACTGGTTTTCAGCTCACCTACACTGCAAATTTGCTGCTCTTGTTCAACATGGGGAGGTTGGTCAAGTGACTAAATTTCTTGCACTTGACAAGTGCCTTCCAGGTCGCAAATTTTTGCAGATTGTTGAAATAGAAACAGTGCCAGGACCTTATGAGATTCAGTATGATGAAGAATGGTTGGCAATAACACGGAAGTTCAACTCTATCTTTCCTTTAACCATCCATCGTGCAAATTTGGGGGGTGCACAGGTTGACATGCAAGATTGTCGTGATTGGGTAAGGAGTAGGCTACTAACAAGGGGGGCCAAACCTTTCGAATTTGTTCAAACGGTTCCTTGCTATGATCCCTCTCAGTCTGCCTCCAATAGTTGCTTTTCTGGTAAGGGTTTTGAGATATCAGATTTCACTTTTAATGTGGTTTGTACCTTGATTTGTCTCCATGAGATTGGGCTTTTTTTTTTTACCCTCTGA 1119 0.4227 MEGCMHGDLDNVYSTLRYLEEVENTKIDLLICCGDFQAVRNKKDLESLNVPPKYRSMNSFWKYYSGQEVAPFPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRIGGLSGIYNERHYHLGHYERPPYNERDIRSVYHVREYDVHKLMQVEEPIDIFLSHDWPCGITDHGNWKELVRYKPFFEKEIQERTLGSKAAAELLEKLKPSYWFSAHLHCKFAALVQHGEVGQVTKFLALDKCLPGRKFLQIVEIETVPGPYEIQYDEEWLAITRKFNSIFPLTIHRANLGGAQVDMQDCRDWVRSRLLTRGAKPFEFVQTVPCYDPSQSASNSCFSGKGFEISDFTFNVVCTLICLHEIGLFFFTL* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0633 372 Pfam Lariat debranching enzyme, C-terminal domain 238 333 IPR007708 GO:0006397|GO:0016788
Vvi18g0633 372 Gene3D - 6 263 IPR029052 -
Vvi18g0633 372 CDD MPP_Dbr1_N 2 255 IPR041816 -
Vvi18g0633 372 PANTHER RNA LARIAT DEBRANCHING ENZYME 2 339 - -
Vvi18g0633 372 Pfam Calcineurin-like phosphoesterase 3 225 IPR004843 GO:0016787
Vvi18g0633 372 SUPERFAMILY Metallo-dependent phosphatases 3 240 IPR029052 -
Vvi18g0633 372 FunFam Lariat debranching enzyme 5 247 - -
Vvi18g0633 372 SMART DBR1_2 231 338 IPR007708 GO:0006397|GO:0016788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0633 K18328 - vvi:100264324 728.398