Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0630 ATGGCGTCAATTAGAAGAACTCAATCGCCTGCCTATCATGACCGTCCGTATCAGAACGGTGGGACTTCGTTTTCGGTGTCATCTCCTTCACAGAAGCTTCTGTCCAACGGTAAATGCTCGTCGCCGTTGCCATTTTTCTCTTCATACGGTGTCGGCATCCGGAGATTCGTCGCCGGAGCTTTTCTTCAGAAGTACTCTCGCAAAGTTTGGCGGCGATCGGCTTATAGGTGTTTGGTGTTCTTTTTGCTCGGTTTCTTGTTAGGTATGTCGCCATTCGGCGAAGTAGAAGATATTAAAAGTCAGGATTTCTCGTTCGAGATCAAGCCGTCACCGGTGAATGTGAAATTGGATCCGGAGAGTGTTGTTAAGCGCGAGGATTTTGTCTTGGATACTGTGAACTTAGGGGTGGAGCGGCAATCGAAGACGAAAGAGAGATTCAATTTTATACCTAAAAAGCAGATAATAGTGGTGACGCCGACCTATAACAGAGCGCTTCAGGCGTTTTACTTGAATAGATTGGGACAGGTGCTTAGGCTGGTGCCTCCGCCAATTTTGTGGATGGTAGTGGAGATGAATGTGGCCTCCATGGAGACTGCTGAGATATTGAGGAAGACGGGGGTTATGTATAGGCATATTGTGTGCACTAAGAATTCTACCAACGTAAAGGACAGGGGAGTTCACCAAAGGAACGCAGCTCTCGAGCACATTGAGCACCATAAGCTTGATGGGATTGTATATTTTGCAGATGATGATAATATCTATTCCCTTGAGTTGTTTAAGGGTTTGAGAGAGATCAGCCGATTTGGCACATGGCCTGTTGCCATGCTTGCACAAAGCAAAAACAAGGCAATATTAGAAGGTCCTGTCTGCAATGGAAGCCAAGTAATTGGATGGCACACAAATGAGAAAAGTAAGAGACTTCGGAGATTTCATGTTGATATGTCAGGATTTGCATTCAACAGCACCATCTTGTGGGATCCAAAGAAATGGCGACGTCCCACTTCAGCTCCAATTCAACAGTTGGACACAGTGAAGGAGGGTTTCCAAGAAACCACATTTATAGAGCAACTGGTGGAAGATGAAAGTCAAATGGAAGGGACACCTGCTGGTTGTTCAAGGATAATGAACTGGCATCTTCATTTGGAAGCTCGAAATCTTGTTTACCCCAGAGGCTGGCTACTTCAGAAGAACCTAGATGTCGTTCTCCCCATTAAATGA 1218 0.4557 MASIRRTQSPAYHDRPYQNGGTSFSVSSPSQKLLSNGKCSSPLPFFSSYGVGIRRFVAGAFLQKYSRKVWRRSAYRCLVFFLLGFLLGMSPFGEVEDIKSQDFSFEIKPSPVNVKLDPESVVKREDFVLDTVNLGVERQSKTKERFNFIPKKQIIVVTPTYNRALQAFYLNRLGQVLRLVPPPILWMVVEMNVASMETAEILRKTGVMYRHIVCTKNSTNVKDRGVHQRNAALEHIEHHKLDGIVYFADDDNIYSLELFKGLREISRFGTWPVAMLAQSKNKAILEGPVCNGSQVIGWHTNEKSKRLRRFHVDMSGFAFNSTILWDPKKWRRPTSAPIQQLDTVKEGFQETTFIEQLVEDESQMEGTPAGCSRIMNWHLHLEARNLVYPRGWLLQKNLDVVLPIK* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0630 405 Pfam Glycosyltransferase family 43 173 382 IPR005027 GO:0015018|GO:0016020
Vvi18g0630 405 CDD GlcAT-I 154 383 IPR005027 GO:0015018|GO:0016020
Vvi18g0630 405 FunFam Glycosyltransferases 153 395 - -
Vvi18g0630 405 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 68 400 IPR005027 GO:0015018|GO:0016020
Vvi18g0630 405 SUPERFAMILY Nucleotide-diphospho-sugar transferases 153 397 IPR029044 -
Vvi18g0630 405 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 153 397 IPR029044 -
Vvi18g0630 405 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0630 Vvi-Chr18 6636211 6638362 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0630 1 405 Glycosyltransferase AT1G27600 65.281 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0630 K20869 - vvi:100248926 813.142