Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0628 ATGGCCGGAGCTTCCCGAGACCAAGCACTGGCTCTCCTCGCCGCTGCCAACAACCATGGAGATTTGGCCGTAAAGCTCTCTTCTCTTAGACAGGCCAAAGATATCTTACTAGCCGTTCACCCCTCATTTGCAGCCGAGCTTTTTCCCTACTTAGTCGAGCTTCAGTCTTCTCCCGAAACCCTAGTTCGAAAATCTCTCATAGAGGCAATAGAAGAGATTGGTTTGAAAGCAATGGAGCATTCTTCTATATTAGTATCAGTCTTATTAGTATTTTTGAGAGATGGCGATTCTATTATTGCAAAGCAATCTATTGTTAGTGGGACAAATTTCTTTTGCAGTGTTCTAGAGGAGTTGGCCCTGCAGTTCCATCGGCATGGTAAAGTTGAGAGGTGGCTTGAAGAGCTTTGGGTGTGGATGGTTAAGTTGAAGGATGCGGTCCTTGCCATTGCGTTGGGGCCTGGTCCTTTTGGGGTGAAGATACTGGCGATGAAGTTTTTGGAAACATATGTGCTACATTTTACATCTGATGCTAATGATTTTGAAAAATCTTCTATAGAAGGAAGTGGACGGGCTTTTAATATTTCTTGGGTGGTTGGTGGTCACCCAGTTCTAGATCCAGCTTCACTCATGTCAGATGCAAATAGGATTATTGGAGTTCTACTAACGTTGTTGCAATCGGCTAGTAGTCTTTCTGGCTGTTTGACAATTACTGTTGTCAATTGGAAATGA 729 0.4376 MAGASRDQALALLAAANNHGDLAVKLSSLRQAKDILLAVHPSFAAELFPYLVELQSSPETLVRKSLIEAIEEIGLKAMEHSSILVSVLLVFLRDGDSIIAKQSIVSGTNFFCSVLEELALQFHRHGKVERWLEELWVWMVKLKDAVLAIALGPGPFGVKILAMKFLETYVLHFTSDANDFEKSSIEGSGRAFNISWVVGGHPVLDPASLMSDANRIIGVLLTLLQSASSLSGCLTITVVNWK* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0628 242 SUPERFAMILY ARM repeat 7 135 IPR016024 -
Vvi18g0628 242 Gene3D - 2 241 IPR011989 -
Vvi18g0628 242 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 1 240 - -
Vvi18g0628 242 Pfam Symplekin/PTA1 N-terminal 97 240 IPR032460 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0628 Vvi-Chr18 6574926 6579734 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0628 K06100 - vvi:100266091 453.751