Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0627 ATGGAGGGTTGGGACCCAAACACGAAATCGGCACTGACGCAGATCCCTCTTCTATCCATAAAAGCAGGTCCACGCGACGGAGCAGCATGGACGCAGAGGCTGAAAGAGGAGTACAAGGCATTGATAGCCTACACAGGGATGAACAAGTCCAACGACAACGATTGGTTCAGAATATCGGCGGCCAACTCTGAAGGAACCAGGTGGACCGGAAAGTGCTGGTATGTTCATAATCTCCTCAAATACGAGTTCGACCTGCAATTTGACATCCCTGTCACATATCCCTTAACTGCCCCCGAGATCGAGCTTCCTCAACTCGATGGCAAGACACATAAGATGTACCGAGGAGGGAAAATTTGTTTGACCGTGCATTTCAAGCCTCTCTGGGCCAAGAACTGCAGAAATTCCGATACTCGTGGATTCTGGAATGATTAA 432 0.4931 MEGWDPNTKSALTQIPLLSIKAGPRDGAAWTQRLKEEYKALIAYTGMNKSNDNDWFRISAANSEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPLTAPEIELPQLDGKTHKMYRGGKICLTVHFKPLWAKNCRNSDTRGFWND* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0627 143 Gene3D Ubiquitin Conjugating Enzyme 1 136 IPR016135 -
Vvi18g0627 143 PANTHER UBIQUITIN-FOLD MODIFIER-CONJUGATING ENZYME 1 5 133 IPR014806 GO:0061657|GO:0071569
Vvi18g0627 143 Pfam Ubiquitin-fold modifier-conjugating enzyme 1 8 133 IPR014806 GO:0061657|GO:0071569
Vvi18g0627 143 SUPERFAMILY UBC-like 5 133 IPR016135 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0627 K12165 - vvi:100264226 287.345