Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0611 ATGGGAACGGTGGAAATAGAGGCACCAATAATCAAGACCAGGACAGATGAAGATGTGAAGGAAGACGAACTCTCTCCGATAGAAGAAGTCCGATTGACAGTACCCAACGACGATGACCCATCTCTACCTGTATGGACATTTCGAATGTGGTTCCTGGGACTCATCTCCTGTGCCCTCCTCTCATTCCTCAACCAGTTCTTCTCCTACCGAAAAGAACCCTTGGTAATAAGCCAGATCACCGTCCAGGTGGCCACGCTCCCAATCGGACGCTTCATGGCCTCAGTCCTCCCAGATATTAAGTTCCACGTCCACATTCCATTCTTCGGAAAAAAAGAGCTCTCTCTCAACCCGGGTCCTTTTAACATGAAGGAGCATGTATTGATCTCCATATTTGCCAATGCTGGAAGTGCTTTTGGCGGTGGATCGGCTTATGCTGTTGGTATTGTTACCATCATTAAGGCTTTTTATAAGAGAAATATTTCCTACTTAGCTGGTTGGATCCTTATCATCACCACTCAGGTTCTGGGTTACGGTTGGGCTGGGCTCTTAAGAAAGTATGTGGTTGAGCCTGCACACATGTGGTGGCCCAGCACCCTTGTTCAGATCTCCCTCTTCCGAACATTGCATGGAAAAGAAAATGAAGTTGATGAGCAAGAAACGGAGGTGCAGCAGCGCACGTCAAGATCAAAATTTTTCCTTATCGCAATGTTGTGTAGCTTCCTCTGGTACATGGTTCCCGGTTACCTCTTCCAGTCCCTACAAAGCATCGCATGGGTCTGCTGGGCCTTTCCTAACTCGGTCACCGCCCATCAAATTGGTTCTGGTTTTAGAGGACTTGGCTTCGGAGCCCTGACCCTGGACTGGACGGTGGTAGCTTCGTTCTTGTTCAGCCCTTTGGTCTGTCCGTTTTTTGCCATTGTCAATGTCTTCATAGGCTATGTCTTGATTATCTACATTGTAATGCCCATTTCCTACTGGGGCCTCAATGTGTACAACGCCAGAACCTTCCCCATCTTCTCTTCCCACTTGTTCACTGCCCAGGGTCAGTCATATAACATCACGGCCATTGTTAATGATAAATTCGAGATTGATCTGGCACAGTATGACATACAAGGAAGGCTCAATTTGAGTTTATTCTTCGCTCTCGCATATGGCTTTGGATTTGCAACTATTGCATCCACACTGTCTCATGTGGGGTTGTTCTATGGAAGGGAGATTTACACTCGATTCCGGGCTTCTCAAGATGAGAAGGTGGATATTCACACAAAATTGATGAAGAAATACGAGGACATACCTTCTTGGTGGTTTCACTTGCTTCTTACTGGGTCGGTACTGGTCTCCCTTGCACTCTGCATCTTCCTGAAAGATGAGGTCCAAATGCCGTGGTGGGGACTTATATTTGCAGCTGGCCTTGCCTTCGTATTCACCCTACCCATCAGCATCATTACGGCCACTACAAATCAGACGCCAGGGCTGAATATCATCACAGAGTACATAATGGGAGTTATATTGCCAGGAAAACCAATAGCTAATGTGTGCTTCAAAACTTATGGGTACATAAGCATGGTTCAGGCTATCTCTTTTCTCGGTGATTTCAAGCTAGGCCATTACATGAAGATCCCTCCAAGATCAATGTTCTTGGTTCAACTCATAGGAACCCTGATAGCTGGATCAGTGAATCTCTTTGTAGCAATGTGGCTTCTGGATTCCATTGACAATATATGTCAGGAGGAGCTCCTTCCAGAAAACAGTCCTTGGACATGCCCTGGTCAGCGAGTCTTCTTCGATGCATCTGTTATCTGGGGTTTAGTGGCGCCCCAGCGAATTTTCGGAACACTCGGCAACTATGGAGCACTGAACTGGTTCTTCCTTGGTGGACTACTTGGTCCAGTTGCAGTATGGATCCTCCATATCTTATTCCCCAGCCAATCTTGGATTCCCCTTGTCAACCTTCCAGTGCTCATAGGAGCAACCGCATCTATGCCACCAGCCACCCCCGTGAACTATAATGCATGGATTTTAGTTGGAACCATCTTCAACTTTTTCGTGTTCAGGTACAGGAAGAAGTGGTGGCAGAGGTATAACTACATTCTTTCAGCAGCTTTGGATGCTGGGGTTGCTTTTATGGCGGTTCTGATCTACTTCACTGTGGGCATTGAGGAAAAGAACTTGTACTGGTGGGGCGCCAACCCTGATATCGATCCTGAACACTGTCCACTAGCATCTTGTCCTACTGCCAAGGGTGTTATTGTGGATGGTTGCCCACGCTTTTAA 2274 0.4692 MGTVEIEAPIIKTRTDEDVKEDELSPIEEVRLTVPNDDDPSLPVWTFRMWFLGLISCALLSFLNQFFSYRKEPLVISQITVQVATLPIGRFMASVLPDIKFHVHIPFFGKKELSLNPGPFNMKEHVLISIFANAGSAFGGGSAYAVGIVTIIKAFYKRNISYLAGWILIITTQVLGYGWAGLLRKYVVEPAHMWWPSTLVQISLFRTLHGKENEVDEQETEVQQRTSRSKFFLIAMLCSFLWYMVPGYLFQSLQSIAWVCWAFPNSVTAHQIGSGFRGLGFGALTLDWTVVASFLFSPLVCPFFAIVNVFIGYVLIIYIVMPISYWGLNVYNARTFPIFSSHLFTAQGQSYNITAIVNDKFEIDLAQYDIQGRLNLSLFFALAYGFGFATIASTLSHVGLFYGREIYTRFRASQDEKVDIHTKLMKKYEDIPSWWFHLLLTGSVLVSLALCIFLKDEVQMPWWGLIFAAGLAFVFTLPISIITATTNQTPGLNIITEYIMGVILPGKPIANVCFKTYGYISMVQAISFLGDFKLGHYMKIPPRSMFLVQLIGTLIAGSVNLFVAMWLLDSIDNICQEELLPENSPWTCPGQRVFFDASVIWGLVAPQRIFGTLGNYGALNWFFLGGLLGPVAVWILHILFPSQSWIPLVNLPVLIGATASMPPATPVNYNAWILVGTIFNFFVFRYRKKWWQRYNYILSAALDAGVAFMAVLIYFTVGIEEKNLYWWGANPDIDPEHCPLASCPTAKGVIVDGCPRF* 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0611 757 NCBIfam small oligopeptide transporter, OPT family 24 721 IPR004648 GO:0055085
Vvi18g0611 757 NCBIfam OPT family oligopeptide transporter 28 718 IPR004813 GO:0035673
Vvi18g0611 757 PANTHER ISP4 LIKE PROTEIN 17 755 IPR004648 GO:0055085
Vvi18g0611 757 Pfam OPT oligopeptide transporter protein 45 716 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0611 Vvi-Chr18 6406367 6409616 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0611 15 755 Organic Solute Cotransporters AT5G64410 75.169 0.0 1170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0611 - - vvi:100242147 1544.25