Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0605 ATGGCGATTGCATCCAATGAATCCACGAGCATCTGCAGTCACTGTGACAAAGCTATTCCTTCTACAAATATCGATTTGCACTATGCTCATTGCTCCCGAAATCTGGAAAGATGTAAACATTGTGGTGACATGGTTCCAAAAAAACATGCTGAGGAACATTACTTAAATACCCATGCTGCGGTATCCTGCTCACTCTGCAGTGAGACTATGGAACGTGAAATTTTAGCTGTTCATAAAGGTGAAAATTGCCCCCAAAGGATTGTCACATGCGAATTTTGTGAGTTTCCTTTGCCTGCAATTGATCTGTCAGAGCATCAGGAAGTATGTGGCAACCGAACGGAATTATGTCATCTGTGTAGAAGGTATGTTAGACTGTGTGAAAGGAATGGCCATGAAGCCATGTGCAATGGTGCACCAGATAACAGTGTTGGTGTCCAAGATAATGGTGTTGGTGTCTCAGATCATACCGTCAGTTCTTCAAGGGATGCAAGAGCAGCTGAGAGAGAACAAGGTGGGCAAAGAAGGCCGCCGCTACAGGGGTTTTCACAGAGACGTCTTCTGTTCACCATTGCAATTACAGGCATTGCTGTTTTATTAGGATCACTCTTCTTCCAGAAGAAAACCGAAAACCACTGA 636 0.4403 MAIASNESTSICSHCDKAIPSTNIDLHYAHCSRNLERCKHCGDMVPKKHAEEHYLNTHAAVSCSLCSETMEREILAVHKGENCPQRIVTCEFCEFPLPAIDLSEHQEVCGNRTELCHLCRRYVRLCERNGHEAMCNGAPDNSVGVQDNGVGVSDHTVSSSRDARAAEREQGGQRRPPLQGFSQRRLLFTIAITGIAVLLGSLFFQKKTENH* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0605 211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 57 IPR013083 -
Vvi18g0605 211 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 3 208 - -
Vvi18g0605 211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 114 IPR013083 -
Vvi18g0605 211 MobiDBLite consensus disorder prediction 147 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0605 Vvi-Chr18 6336146 6342038 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0605 - - vvi:100262568 440.269