Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0586 ATGGAGATGGTGAATGACATCGCGATTCAAGTGGGGATGATTTTGTTCACTGTATTGTTGTTTCTTTATATGAACGATATTCCCGGAAAAGCCCTAGCTAAGCTCAGCTTATGGTACAACCAAACCAATCTCGAAGCCAAGCGCCACTTCGTCCTCGGGGCTCAGCGCCTTGCGCAAGCCAGATCCCCCAACACTCCTCACTCCGACGTCATCTCCCTCGCCAAAACTGCCGCAGAGGAAGCCGACAAGGCACTCTCCCTCAATCCCAAAGACGCCGCGGCTCACATCCTCAAAGCCCTAGCTCTCGACCTCCAGGGCTTCAGGCTCTCCGCGCTGGACTCCCTGGACGCCGCCCTCTCCCCACTGGCCGTCAAGTCCCTCACGGATGAGGAGCGAGGCGACGCGCTGATCAAGCGGGCACAGTTGAAGATTGGGTTGGATAAAGTGGGGCGAGTGGATTCGGCGGTGGCAGACCTGGTGGAAGCGGTGAGGGTGGGTAGTGAGAAGGACAAGGCGTATTGCCTGCTGGGGGAGTGTTATGAGATGAAGGAGATGAAGGAGGAGGCCACAAAGGCGTATCAGGAGGCCATTACGATCCAACCCAACTCCGCCCTCGCTCGAGATGCCTTGGACCGCTTGACCTCCCGTTGA 651 0.573 MEMVNDIAIQVGMILFTVLLFLYMNDIPGKALAKLSLWYNQTNLEAKRHFVLGAQRLAQARSPNTPHSDVISLAKTAAEEADKALSLNPKDAAAHILKALALDLQGFRLSALDSLDAALSPLAVKSLTDEERGDALIKRAQLKIGLDKVGRVDSAVADLVEAVRVGSEKDKAYCLLGECYEMKEMKEEATKAYQEAITIQPNSALARDALDRLTSR* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0586 216 SMART tpr_5 170 203 IPR019734 GO:0005515
Vvi18g0586 216 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 6 77 210 - -
Vvi18g0586 216 Pfam Tetratricopeptide repeat 171 202 IPR001440 GO:0005515
Vvi18g0586 216 SUPERFAMILY TPR-like 76 210 IPR011990 GO:0005515
Vvi18g0586 216 Gene3D Tetratricopeptide repeat domain 72 216 IPR011990 GO:0005515
Vvi18g0586 216 ProSiteProfiles TPR repeat profile. 170 203 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0586 - - vvi:100248933 398.667