Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0580 ATGTCTTCTGAATCCAATCTGATTAACACTGTGGAGGCTTTTCTCGGAGTGTCGTTGGGCTCGGAATCGGCGGTTGTGATCCTGACGACGACGGTGGCGGTGATTTTGGGGTTGTTGATCTTCGTGTGGAGAATATCGTCGGATCGAGGAAGGGATGTGAAGCCGCTCGTGGTTCCGAAGGCGGTGGCGATTCCAGCGGAAGAGGATGAGGCAGAGGCTGCGGTGGGGAAAACTAAGGTCACTGTCTTCTTTGGTACTCAGACTGGAACTGCCGAGGGTTTTGCCAAGGCTTTAGCCGAAGAGATTAAGGCAAGATACGACAAAGCAACCATTAAAGTTGTTGACCTGGATGACTATGCTGTGGATGATGATCAATATGAAGAAAAACTGAAGAAAGAGGCTTTGGCTTTTTTCATGTTGGCCACTTATGGAGATGGAGAGCCAACTGATAATGCTGCTAGATTTTACAAATGGTTTACTGAGGGAAAAGAGAGGGAGGCCTGGCTTCAACAACTCACATATGGTGTTTTTGGTCTGGGTAACCGCCAATATGAACATTTTAACAAGATAGCAAAGGTAGTGGATGAACTACTAAGTGAGCAAGGAGCAAAACGTCTTGTTCCAGCTGGTCTTGGTGATGACGATCAGTGCATTGAGGATGATTTTGCTGCTTGGAGAGAATTACTGTGGCCAGAGTTAGATCTATTACTCCGAGATGAAGATGATATAAGTGCTGTGTCCACTCCATATACAGCTGTTATCCCTGAATACAGGGTAGTTATTCATGATCCTATTGTTACATCTTGTGAAGATAAATTCCTAAATATGGCAAATGGGAATGCTTCTTTTGATATTCACCATCCATGCAGAGTTAATGTTGCAGTTCAGCGAGAGCTTCACACACTGGAGTCTGATCGTTCCTGCATACATCTGGAGTTTGACACATCAGGCACTGGTATAACATATGAAACTGGAGACCATGTGGGCGTTTATGCTGAGAATTGTGATGAAACTGTTGAAGAAGCAGGAAGGTTGTTGGGTCAACCTCTAGATTTGCTTTTTTCGATTCACACTGATAAAGATGATGGCACGTCCTTAGGCAGCTCATTGCCACCTACTTTTCCTGGTCCTTGCACCATTCGCACTGCACTTGCATGTTATGCAGATCTCTTGAACTCCCCACGGAAGGCTGCATTAAGTGCATTGGCTGCTCATGCAATTGAGCCTGGTGAAGCAGAAAGACTAAAGTTCTTGGCATCACCTCAGGGGAAGGATGAGTACTCACAATGGGTTGTTGGAAGTCAGAGGAGTCTCCTTGAGGTAATGGCTGAGTTCCCTTCAGCGAAACCTCCCCTCGGTGTTTTCTTTGCAGCAATTGCCCCTCGATTGCAGCCTCGTTACTATTCAATCTCATCCTCTCCTAGGTATGCGTCCCATAGAGTTCATGTAACCTGTGCTTTGGTCTATGGTCCAAGTCCCACAGGCAGAATTCACAAAGGGGTGTGTTCAACCTGGATGAAGAATGCAGTTTCTTTAGAGAAAAGCCATAACTCTAGCTGGGCTCCTATTTTTATTAGGCCATCAAATTTCAAATTACCTGTTGATCCTTTGACTCCAATTATCATGGTGGGACCTGGTACTGGCTTGGCACCTTTCAGAGGATTTCTACAGGAAAGATTGGCCCTCAAAGAGGATGGTGTTCAACTTGGTCCTGCTCTACTATTCTTTGGATGTCGGAATCGCCGGATGGATTTCATTTATGAGGATGAACTCAATAATTTTGTTGAACAAGGTATTCTGTCTGAGTTGATTTTGGCATTTTCACGAGAGGGGCCACAAAAGGAGTATGTGCAACATAAGATGATGGATAGAGCATCATACATATGGAATATAATCTCTCAGGGGGGATATCTTTATGTTTGTGGTGATGCCAAGGGTATGGCCAAAGATGTTCATCGAACTTTGCATACCATTGTCCAGGAGCAGGAAAATGTGGAGTCATCCAAGGCGGAGGCTATAGTGAAGAAACTTCACACAGAAGGACGTTATCTTAGAGATGTCTGGTGA 2067 0.4499 MSSESNLINTVEAFLGVSLGSESAVVILTTTVAVILGLLIFVWRISSDRGRDVKPLVVPKAVAIPAEEDEAEAAVGKTKVTVFFGTQTGTAEGFAKALAEEIKARYDKATIKVVDLDDYAVDDDQYEEKLKKEALAFFMLATYGDGEPTDNAARFYKWFTEGKEREAWLQQLTYGVFGLGNRQYEHFNKIAKVVDELLSEQGAKRLVPAGLGDDDQCIEDDFAAWRELLWPELDLLLRDEDDISAVSTPYTAVIPEYRVVIHDPIVTSCEDKFLNMANGNASFDIHHPCRVNVAVQRELHTLESDRSCIHLEFDTSGTGITYETGDHVGVYAENCDETVEEAGRLLGQPLDLLFSIHTDKDDGTSLGSSLPPTFPGPCTIRTALACYADLLNSPRKAALSALAAHAIEPGEAERLKFLASPQGKDEYSQWVVGSQRSLLEVMAEFPSAKPPLGVFFAAIAPRLQPRYYSISSSPRYASHRVHVTCALVYGPSPTGRIHKGVCSTWMKNAVSLEKSHNSSWAPIFIRPSNFKLPVDPLTPIIMVGPGTGLAPFRGFLQERLALKEDGVQLGPALLFFGCRNRRMDFIYEDELNNFVEQGILSELILAFSREGPQKEYVQHKMMDRASYIWNIISQGGYLYVCGDAKGMAKDVHRTLHTIVQEQENVESSKAEAIVKKLHTEGRYLRDVW* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0580 688 FunFam NADPH--cytochrome P450 reductase 60 249 - -
Vvi18g0580 688 Gene3D - 532 688 IPR039261 -
Vvi18g0580 688 Pfam FAD binding domain 282 505 IPR003097 GO:0016491
Vvi18g0580 688 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 286 533 IPR017927 GO:0016491
Vvi18g0580 688 PIRSF P450R 17 688 IPR023208 GO:0003958
Vvi18g0580 688 Hamap NADPH--cytochrome P450 reductase [POR]. 6 688 IPR023208 GO:0003958
Vvi18g0580 688 Gene3D - 52 245 IPR029039 -
Vvi18g0580 688 FunFam NADPH--cytochrome P450 reductase 332 464 - -
Vvi18g0580 688 SUPERFAMILY Flavoproteins 76 237 IPR029039 -
Vvi18g0580 688 Gene3D Translation factors 288 531 - -
Vvi18g0580 688 FunFam NADPH--cytochrome P450 reductase 1 532 688 - -
Vvi18g0580 688 Pfam Oxidoreductase NAD-binding domain 542 652 IPR001433 GO:0016491
Vvi18g0580 688 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 614 630 IPR001709 GO:0016491
Vvi18g0580 688 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 541 560 IPR001709 GO:0016491
Vvi18g0580 688 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 500 509 IPR001709 GO:0016491
Vvi18g0580 688 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 570 579 IPR001709 GO:0016491
Vvi18g0580 688 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 322 332 IPR001709 GO:0016491
Vvi18g0580 688 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 637 645 IPR001709 GO:0016491
Vvi18g0580 688 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 466 473 IPR001709 GO:0016491
Vvi18g0580 688 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 583 594 IPR001709 GO:0016491
Vvi18g0580 688 PRINTS Flavodoxin signature 81 94 IPR001094 GO:0010181
Vvi18g0580 688 PRINTS Flavodoxin signature 171 181 IPR001094 GO:0010181
Vvi18g0580 688 PRINTS Flavodoxin signature 137 148 IPR001094 GO:0010181
Vvi18g0580 688 PRINTS Flavodoxin signature 195 214 IPR001094 GO:0010181
Vvi18g0580 688 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 529 688 IPR039261 -
Vvi18g0580 688 CDD CYPOR 284 688 - -
Vvi18g0580 688 Gene3D - 332 464 IPR023173 GO:0016491
Vvi18g0580 688 ProSiteProfiles Flavodoxin-like domain profile. 80 230 IPR008254 GO:0010181
Vvi18g0580 688 SUPERFAMILY Riboflavin synthase domain-like 279 530 IPR017938 -
Vvi18g0580 688 Pfam Flavodoxin 82 225 IPR008254 GO:0010181
Vvi18g0580 688 PANTHER NITRIC OXIDE SYNTHASE-RELATED 74 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0580 Vvi-Chr18 5873361 5891131 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0580 K00327 - vvi:100256291 1324.69