Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0576 ATGGAGTCGCTAGCTTCTTCTTCTACAGTTCAACTGCAGTCGCCGCCGTCTGGCCTCTCAATAAACACCACTCCCAAACCTAGAAACTCAGTCACTTTCAAACATAGAAGCAAGCAGGTGTGGTGCACCTCCTCTTCAACCATGAAGACATCGGCCACTGATCCTTCTACGAAGAAGGCCAAGGAGGCAAAGCTTTGGGGCGGACGCTTCGAAGAGGGCGTCACGGACGCGGTCGAGCGCTTCACCGAGTCCATTTCTTTCGACAAGGCTCTCTACAAACAAGATATTATGGGGAGTAGGGCTCATGCCTCAATGCTTGCTCACCAGGGATTGATCAGTGTTAGTGATAGGGATAGTATTTTGCAAGGTCTTGATAACATAGAGAGGCGCATTGAAGATGGTGAGTTTGTGTGGAGGACTGACAGGGAGGATGTGCACATGAACATTGAAGCAGCACTTACTGATTTGATTGGTGAGCCTGCGAAGAAGCTCCACACAGCTAGGAGTCGTAATGATCAAGTCTTGACTGATTTTCGCCTGTGGTGTCGTGATGCTATTGATAACATTGTTGCTCGCATCGAACATCTTCAGGTTGCATTAGTTACCTTGGCTATGAAGAATGAGAACTTGATTGTTCCTGGTTATACACACCTACAAAGGGCACAACCAATTTTGCTGCAGCATCTTCTCTTAGCGTATGTTGAGCAGCTTGATCGTGATGCTGGTCGTCTACTGGATTGCAGACAGAGGCTGAATTTCTGCCCCCTAGGTGCATGTGCATTGGCTGGCACTGGCCTTCCCATTGATAGGTTTATGACTTCGCATGATTTAGGATTCAATGCTCCCATGAGAAACAGCATTGATGCAGTTTCAGACCGAGATTTTGTGTTGGAGTTTCTTTCTGCTAATTCCATCACAGCCATTCATCTTTCTCGACTTGGTGAAGAATGGGTATTGTGGGCTTCAGAGGAATTTGGATTTCTCACCCCAAGTGACTCTGTTTCAACCGGAAGTAGCATAATGCCTCAGAAGAAAAACCCAGATCCCATGGAACTGGTTCGTGGAAAATCTGCTAGAGTTGTAGGAGATCTGGTTACTCTTCTCGTATTGTGCAAGGGCCTTCCACATGCCTATAATCGTGATTTGCAGGAAGATAAAGAACCTACATTTGACAGCACTAAGACAATAATAGGGATGCTTGAAGTGTGTGCTGAGTTTGCACAGAACATTACCTTTAATCGTGAGAAAATAAAAAAAGCATTACCTGCTGGTCATCTTGATGCCACAACACTTGCAGACTATCTCGTGAAGAAGGGAATACCCTTCAGAACTTCTCATGACATAGTTGGAAAGTCTGTTGCCTTGTGTGTCTCAAAAAATTGCCAACTCCAGGACCTGAGTCTTGATGAATTGAGAAGCGTAAATCCAGTGTTTGACGAGGATGTATATGAGTTCCTTGGAGTAGAAAATGCAGTAAAGAAATTCTGCTCGTATGGTTCCACAGGTTCAGAATGTGTTGCAGAACAACTTGACTTCTGGGTTACTAAGCTTCAAATCAACACAGCTGGACATAAATAG 1578 0.4512 MESLASSSTVQLQSPPSGLSINTTPKPRNSVTFKHRSKQVWCTSSSTMKTSATDPSTKKAKEAKLWGGRFEEGVTDAVERFTESISFDKALYKQDIMGSRAHASMLAHQGLISVSDRDSILQGLDNIERRIEDGEFVWRTDREDVHMNIEAALTDLIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDNIVARIEHLQVALVTLAMKNENLIVPGYTHLQRAQPILLQHLLLAYVEQLDRDAGRLLDCRQRLNFCPLGACALAGTGLPIDRFMTSHDLGFNAPMRNSIDAVSDRDFVLEFLSANSITAIHLSRLGEEWVLWASEEFGFLTPSDSVSTGSSIMPQKKNPDPMELVRGKSARVVGDLVTLLVLCKGLPHAYNRDLQEDKEPTFDSTKTIIGMLEVCAEFAQNITFNREKIKKALPAGHLDATTLADYLVKKGIPFRTSHDIVGKSVALCVSKNCQLQDLSLDELRSVNPVFDEDVYEFLGVENAVKKFCSYGSTGSECVAEQLDFWVTKLQINTAGHK* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0576 525 PRINTS Argininosuccinate lyase family signature 204 224 - -
Vvi18g0576 525 PRINTS Argininosuccinate lyase family signature 372 391 - -
Vvi18g0576 525 PRINTS Argininosuccinate lyase family signature 163 185 - -
Vvi18g0576 525 PRINTS Argininosuccinate lyase family signature 255 271 - -
Vvi18g0576 525 PRINTS Argininosuccinate lyase family signature 337 353 - -
Vvi18g0576 525 PRINTS Argininosuccinate lyase family signature 293 317 - -
Vvi18g0576 525 NCBIfam argininosuccinate lyase 65 513 IPR009049 GO:0004056|GO:0042450
Vvi18g0576 525 SUPERFAMILY L-aspartase-like 65 516 IPR008948 GO:0003824
Vvi18g0576 525 Pfam Lyase 68 362 IPR022761 -
Vvi18g0576 525 Pfam Argininosuccinate lyase C-terminal 427 492 IPR029419 -
Vvi18g0576 525 Gene3D Fumarase/aspartase (Central domain) 181 510 - -
Vvi18g0576 525 Gene3D - 422 494 - -
Vvi18g0576 525 PRINTS Fumarate lyase superfamily signature 164 182 IPR000362 -
Vvi18g0576 525 PRINTS Fumarate lyase superfamily signature 209 227 IPR000362 -
Vvi18g0576 525 PRINTS Fumarate lyase superfamily signature 293 320 IPR000362 -
Vvi18g0576 525 PRINTS Fumarate lyase superfamily signature 337 353 IPR000362 -
Vvi18g0576 525 PANTHER ARGININOSUCCINATE LYASE 24 520 IPR009049 GO:0004056|GO:0042450
Vvi18g0576 525 Gene3D - 84 291 IPR024083 -
Vvi18g0576 525 CDD Argininosuccinate_lyase 84 517 IPR009049 GO:0004056|GO:0042450
Vvi18g0576 525 ProSitePatterns Fumarate lyases signature. 337 346 IPR020557 GO:0003824
Vvi18g0576 525 FunFam Argininosuccinate lyase chloroplastic 291 449 - -
Vvi18g0576 525 FunFam Argininosuccinate lyase 63 168 - -
Vvi18g0576 525 MobiDBLite consensus disorder prediction 1 30 - -
Vvi18g0576 525 Hamap Argininosuccinate lyase [argH]. 64 515 IPR009049 GO:0004056|GO:0042450
Vvi18g0576 525 FunFam Argininosuccinate lyase 423 494 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0576 K01755 - vvi:100262660 1048.88