Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0573 ATGGAAGTTTCCCGTGCGGAATGTGTTCGCGTTGCGGTTAACATAAGACCACTCATTACATCAGAGCTTCTCATTGGCTGTACAGATTGCATAACAGTGGTTCCTGGAGAGCCACAGACGGGCTCGGGGAAAACATACACAATGGGAACCAATTATACAGGAGAAGAAAGTAGTGGTGGAATTATACCAAAAGTTATGGAAAGTATATTTTCAAGAGTGGAGGCCATGAAAGACTCCACCGAATTTTTAATTAGAGTATCATTTATCGAGATTTTTAAGGAAGAAGTATTTGATTTGCTTGACCCAAATTCATCAGCTACCTCCAAAGTTGAAGGGGTATGTGTAACTAAGCCTACTGGACCAGCAAGAGTGCCTATACAAATTAGAGAAACAGTAAGCGGGGGCATAACCCTTGCTGGCGTGACAGAAGCAGAAGTTAGGACAAAAGAAGAAATGGCATCATACCTATCACACGGTTCCACAGCTCGTGCTACTGGAAGTACTAATATGAATAGTCAATCAAGTCGCTCGCATGCCATTTTCACAATATCTATGGAGCAAAAGAAAATTGCTCGTGTTGGAGTAAGTAATGATGATGTGGGAGATGATATCCTATGTGCAAAACTCCATTTAGTGGATCTTGCTGGTTCTGAACGAGCAAAACGGACAGGAGCGGATGGGATGCGATTTAAAGAAGGAATTCATATTAATAAGGGATTGCTTGCTCTTGGCAACGTGATAAGTGCCTTGGGAGATGAGAAGAAGCGGAAAGAAGGAGGTCATGATTCTCTTGGAGGAAACAGCAAAACCGTCATGATTGCTTGTGTTAGTCCTGCTGATACAAATGCAGAAGAGACCTTAAACACTTTGAAGTATGCAAATCGTGCTCGAAATATTCAGAACAAGGCAGTTATCAACCGTGATCCAATGGCAGCTCAAATGCAAAGAATGCGGAGCCAAATTGAGCAATTACAGTCTGAGCTTCTTTATTTCCGTGGCGATGCTGGTGCTCCATTTGAGGAACTTCAGATTCTCAAGCACAAAATTTCTTTGCTTGAAGAGAGCAATGCTGAGCTACAAAGGGAGCTTCAAGAGCGCCGAATCACCTGTGATCATTTAACACAACGTGCTCTTGATGCCCAGGTTGAAAAAGACAAATTGATTATGAAAATTGAATCAGCCAGAAATGGGAAATCTTGGGATGAGATGGAGTCTGATTCAGATCAGAATTTTAGTCTGCTAAAATCCTATGTGTCAAAAATTCAAGAATTAGAGGGTGAATTGTTGCACCTACAAAGTTTGAATAGCTCAAAACATAGTGATTTTGTTGTTGATGGCACTGACTTGGATGATGATAGTCTCCGCGCAAAAAATGCATATTTCAGAAGCCTTAATGAGCTTTCATCAGCTTGTGATACAAAAGGTGAGATTGAAGATGATGAAAAGGAGTTAGAATACACTTCCCTTCAAGAAAAATTTGATATGGAGCTCAAAGAGTTGGACAAAAAACTTGAACAAAAAGAGGCTGAAATGAAGCGGTTTGCAAGTGCTGATACATCAGTTCTTAAACTACATTATGAGAAGAAACTTCTGGAATTGGAACAAGAGAAGAAAGCGTTGCAGAAAGAGATTGAGGAGCTGAGGCATGACCTTGCAAGTATTTCTTCCACTTCTGATGATGGTGCCCAAAAATTAAAGGAAGATTACCTTCAAAAATTGAATGTACTTGAAAAACAGGTTTCAGAGTTGAAGAAGAAACAAGATGCGCAATCTCAACTCTTAAGACAAAAGCAAAAAAGTGATGAGGCTGCAAAACGGTTACAGGATGAGATTCAGAGAATAAAATCCCAAAAGGTTCAATTGCAACATAAGATCAAGCAAGAATCTGAGCAGTTTAGGTTATGGAAGGCATCGCGGGAAAAAGAAGTTCTTCAGCTTAAGAAAGAGGGAAGGAGGAACGAGTATGAGATGCATAAGCTATTAGCTTTAAACCAAAGGCAAAAGATGGTTTTGCAACGAAAGACTGAAGAAGCTTCTATGGCAACAAAGAGACTAAAAGAACTATTAGAATCTCGAAAGGCATCATCACGCGAAACATTAGGTGCTGGGAATGGAAATGGTCCTGGAGTTCAGGCCCTGATGCAGGCAATTGAGCATGAGCTTGAAGTCACAGTACGGGTACATGAAGTGCGTTCTCAATATGAGCATCAAATGGAAGAGAGAGCTAGGATGGCCAGGGAGGTTGCAAAACTGAAGGAAGAAGCAGATATGCTGAAGCAAAAAGATTTTGGAAGTTTCCCTGAGACAATGTCTCCTGGTGCAAGAAATTCTAGGATTTTTGCTCTTGAAAACATGCTCACTACATCGTCTAGCACCCTGGTTTCTATGGCATCACAGTTATCTGAAGCAGAAGAGCGTGAACGGGTCTTTAGCGGCAGGGGACGCTGGAACCAAGTTCGATCTCTTGCTGAAGCAAAAAATATGATGAATTATCTGTTCAACTTAGCATCCTCATCTAGGTGTAAGTTATGGGATAAAGAACTTGACAGCAGGGAGAAAGATTCAGAAATAAGAGACTTGAAGGAAAAAGTGGTCAAGCTCAGTGGTTTGGTTAGACAACTGGAAATACAAAAGGCTGAACTTCTTCATCGAGAGAAGCTACAGAAATTAGCTTCAAAGAAGCATGACATGGATAATGCGGGTCGGAAGTATGATTTTCGTGAGGGACCTCGGCGGTCTGTGATTTTGTTGGAGGACATGGATACATCTGAATCAGAACATTCTAGCACAGACAGTGCCGATGATGATGACTGGGTAGAATCAGGAAAAAGGCCAAGGAAGAAAAGGAATTCCAAAGCTGGAGGTCAATCACGTGTAGGTTCGGATATCAGTAGTTCAGAAAATTTGAGAACGGAAAATTCAGGAATATGTTGCTCTTGTAGTAAATCATCTTTTTGTAAACTAAAGAAATGTGAGTGTCGTGCTGCTGGAGGCACTTGTAGGGACTCATGCAGCTGTGCACCTAATAAGTGCACTAACAGAGAAACAATTAAGGTTGAGGAGTTGGATGACTTCCTGCAATCAGCGGTTGCTGAAGGCATTGGGAACTTGTCAGGCAGTGATGATACACAGAAGTACCACGACCTTGCTTCTCATGGTGCAATGCTGCTCCAGAGTGCACTAGTTGATGAGCCTGCTGAGGCAAATGATGATTGTGAATCCAAAAGGAAGCCTTTATCCGAAATTGGGAACAAAATGGCCAGAGCAAAGGCACCTAAGCCTAATCCAAGAAAGAAATGGCGAAAATCAGTAATTCAGCTAGTTTCTGTAGCCCCACCTTCGTCGCAGCCAGAGAATACTGAAGCTCCCAAGAAGGCAGAGAACACTGCAGTTGAGGTAGACATCCCTTTGAAGTTACCCAGGGCTATGAGATCGGCAGCATCAAATGGCAACCCCTTTAGAGTTAGAAATTCTGATCAGCCAGACGAATCAGCAGCCAACAACAAGGAGACTGTCGCTTCTGCCTCAAGAAGTCCAGTCCGGCAGGCAAGAACATTGGATGAGAAAGAGAACTATGGTCCTTAA 3585 0.4209 MEVSRAECVRVAVNIRPLITSELLIGCTDCITVVPGEPQTGSGKTYTMGTNYTGEESSGGIIPKVMESIFSRVEAMKDSTEFLIRVSFIEIFKEEVFDLLDPNSSATSKVEGVCVTKPTGPARVPIQIRETVSGGITLAGVTEAEVRTKEEMASYLSHGSTARATGSTNMNSQSSRSHAIFTISMEQKKIARVGVSNDDVGDDILCAKLHLVDLAGSERAKRTGADGMRFKEGIHINKGLLALGNVISALGDEKKRKEGGHDSLGGNSKTVMIACVSPADTNAEETLNTLKYANRARNIQNKAVINRDPMAAQMQRMRSQIEQLQSELLYFRGDAGAPFEELQILKHKISLLEESNAELQRELQERRITCDHLTQRALDAQVEKDKLIMKIESARNGKSWDEMESDSDQNFSLLKSYVSKIQELEGELLHLQSLNSSKHSDFVVDGTDLDDDSLRAKNAYFRSLNELSSACDTKGEIEDDEKELEYTSLQEKFDMELKELDKKLEQKEAEMKRFASADTSVLKLHYEKKLLELEQEKKALQKEIEELRHDLASISSTSDDGAQKLKEDYLQKLNVLEKQVSELKKKQDAQSQLLRQKQKSDEAAKRLQDEIQRIKSQKVQLQHKIKQESEQFRLWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEEASMATKRLKELLESRKASSRETLGAGNGNGPGVQALMQAIEHELEVTVRVHEVRSQYEHQMEERARMAREVAKLKEEADMLKQKDFGSFPETMSPGARNSRIFALENMLTTSSSTLVSMASQLSEAEERERVFSGRGRWNQVRSLAEAKNMMNYLFNLASSSRCKLWDKELDSREKDSEIRDLKEKVVKLSGLVRQLEIQKAELLHREKLQKLASKKHDMDNAGRKYDFREGPRRSVILLEDMDTSESEHSSTDSADDDDWVESGKRPRKKRNSKAGGQSRVGSDISSSENLRTENSGICCSCSKSSFCKLKKCECRAAGGTCRDSCSCAPNKCTNRETIKVEELDDFLQSAVAEGIGNLSGSDDTQKYHDLASHGAMLLQSALVDEPAEANDDCESKRKPLSEIGNKMARAKAPKPNPRKKWRKSVIQLVSVAPPSSQPENTEAPKKAENTAVEVDIPLKLPRAMRSAASNGNPFRVRNSDQPDESAANNKETVASASRSPVRQARTLDEKENYGP* 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0573 1194 Coils Coil 857 877 - -
Vvi18g0573 1194 MobiDBLite consensus disorder prediction 1067 1194 - -
Vvi18g0573 1194 Coils Coil 342 376 - -
Vvi18g0573 1194 Coils Coil 490 517 - -
Vvi18g0573 1194 Gene3D Kinesin motor domain 37 332 IPR036961 -
Vvi18g0573 1194 MobiDBLite consensus disorder prediction 919 944 - -
Vvi18g0573 1194 Coils Coil 566 631 - -
Vvi18g0573 1194 PRINTS Kinesin heavy chain signature 208 226 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0573 1194 PRINTS Kinesin heavy chain signature 29 50 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0573 1194 PRINTS Kinesin heavy chain signature 249 270 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0573 1194 PRINTS Kinesin heavy chain signature 168 185 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0573 1194 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 4 1168 IPR027640 GO:0003777|GO:0007018
Vvi18g0573 1194 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 332 IPR027417 -
Vvi18g0573 1194 ProSitePatterns Kinesin motor domain signature. 207 218 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vvi18g0573 1194 Coils Coil 414 434 - -
Vvi18g0573 1194 Coils Coil 734 761 - -
Vvi18g0573 1194 MobiDBLite consensus disorder prediction 954 969 - -
Vvi18g0573 1194 SMART kinesin_4 6 307 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0573 1194 MobiDBLite consensus disorder prediction 919 969 - -
Vvi18g0573 1194 Pfam Kinesin motor domain 39 299 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0573 1194 ProSiteProfiles Kinesin motor domain profile. 1 299 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vvi18g0573 1194 Coils Coil 523 557 - -
Vvi18g0573 1194 MobiDBLite consensus disorder prediction 1150 1181 - -
Vvi18g0573 1194 Coils Coil 671 691 - -
Vvi18g0573 1194 MobiDBLite consensus disorder prediction 1068 1083 - -
Vvi18g0573 1194 MobiDBLite consensus disorder prediction 1108 1123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0573 Vvi-Chr18 5807852 5820694 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0573 40 389 Miscellaneous Gene Families AT4G39050 33.152 2.34e-39 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0573 - - vvi:100247280 2159.03