Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0568 ATGAAGCTGTTGGAGGAGTTGAACCCATCTCAGAGAGTAGCATTGGGAGGTCTATTGGTGATCCTGTTGCCATGTTTCTTCCCCACTCTCTTCACTCCCTTGGGCCGTGCTTCCCCGTCCATTTTCTCCGAATGGAATGCTCCAAAACCTAGGCATTTACAGCTACTGAAGGGCGCCTTGCAACTCCAAACTCCTGATAGGCAACAAGCCAATCTCTGGTCTCCATTAGCTAACCAAGGATGGAAACCCTGTGTTGACTCTGCAGACACCCCTTTGTTGCCAAAGAAATCTCAGGGGTATGTCCAAGTATTTCTTGATGGAGGGTTAAACCAGCAGAGAATGGGGATCTGTGATGCAGTTGCTGTTGCAAAGATTTTGAATGCAACCCTTGTGATCCCTCACCTTGAAGTGAATCCTGTTTGGCAAGATTCAAGTTCATTCGCAGAAATATTTGATATTGATCATTTTATTAATGTCCTGAAAGATGACATTTTTATAGCTAAAGAGTTGCCTAGCAAATATTCTTGGAGCACAAGGGAGTATTACGCAACCGGCATACGGGCTACTAGAATTAAAACTGCACCTATTCATGCTTCAGCTATTTGGTATCTGGAAAATGTCTTACCTGTATTGCAGAGTTATGGAATTGCTGCTCTTGCCCCATTCTCTCATCGTTTGGCTTTTGACAACTTACCTGCGTACATCCAACGCTTACGCTGCAAAGTTAATTTCAAAGCACTAGTTTTTGTTCCTCATATCAAAGCATTGGGAGAGGCCCTTGTCAATCACATCCGATATCTGCCTATTGAAAGCAGAGCAGGAGGGACTGAGTACCTGCAGGATAGAACAGATGAGATTAACCACAAGCAAGGGGCTGGGAAGTTTGTTGTGTTACATCTTCGCTTTGATAAAGATATGGCTGCTCATTCAGCCTGTGATTTTGGTGGAGGTAAAGCTGAAAAAATGGCTCTTGCAAAATACCGTCAAGTGATTTGGCAGGGAAGGGTCCTAAAATCTCAGTTCACAGATGAGGAATTGAGAAATCAAGGGCGCTGCCCATTGACTCCTGAAGAGATTGGATTGCTTCTAGCAGCTTTGGGCTTCAGTAACACTACCCGTCTCTATCTTGCTTCCCACAAGGTTTATGGTGGAGAGGCTAGGATCTCAACTTTGCGCAAATTGTTTCCCTTAATGGAAGATAAAAAGAGCCTTGCTTCTGCAGAGGAACTGGCGAAGGTTGAAGGGAAGGCTTCTTTATTGGCTGCAGTTGATTATTATGTGAGCATGCACAGTGACATCTTCATCTCTGCTTCTCCGGGCAATATGCACAATGCGTTGGTGGGACACCGAGCTTACAAGAACTTGAAGACTATAAGACCGAACATGGCATTGTTGGGCCAGCTCTTCCTGAATAAGAGCATTGAATGGTCAGAATTTCAGCAGGCAGTTCTGAATGGGCATAAAAGTAGACAAGGGCAAATCAGGTTTAGAAAGGAGAATCAATCCATATATACATATCCTATTACTGATTGCATGTGTCAAGCTTAA 1548 0.4406 MKLLEELNPSQRVALGGLLVILLPCFFPTLFTPLGRASPSIFSEWNAPKPRHLQLLKGALQLQTPDRQQANLWSPLANQGWKPCVDSADTPLLPKKSQGYVQVFLDGGLNQQRMGICDAVAVAKILNATLVIPHLEVNPVWQDSSSFAEIFDIDHFINVLKDDIFIAKELPSKYSWSTREYYATGIRATRIKTAPIHASAIWYLENVLPVLQSYGIAALAPFSHRLAFDNLPAYIQRLRCKVNFKALVFVPHIKALGEALVNHIRYLPIESRAGGTEYLQDRTDEINHKQGAGKFVVLHLRFDKDMAAHSACDFGGGKAEKMALAKYRQVIWQGRVLKSQFTDEELRNQGRCPLTPEEIGLLLAALGFSNTTRLYLASHKVYGGEARISTLRKLFPLMEDKKSLASAEELAKVEGKASLLAAVDYYVSMHSDIFISASPGNMHNALVGHRAYKNLKTIRPNMALLGQLFLNKSIEWSEFQQAVLNGHKSRQGQIRFRKENQSIYTYPITDCMCQA* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0568 515 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 16 514 - -
Vvi18g0568 515 PIRSF UCP009360 6 515 IPR024709 -
Vvi18g0568 515 CDD O-FucT_plant 100 458 IPR024709 -
Vvi18g0568 515 Pfam GDP-fucose protein O-fucosyltransferase 100 452 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0568 Vvi-Chr18 5743454 5750670 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0568 72 514 Miscellaneous Gene Families AT1G22460 34.557 4.49e-88 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0568 - - vvi:100253892 1037.33