Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi18g0563 | ATGAAAGGTAAACGTCTAGCAAGTAGTAAAAGTCATGTTGTCAAGGAAGAGGAAGAGAAAGCAGCTGATCAATTGAGGGGAAAGGTCTTGCCTGGGGATTTAATATGGGTCAGGCTCCGTGGGTTATCATGGTGGCCAGCTCAGGTTGTTAATGAGAATGCTGTGAGTAGAAGCAATAAACCTGGTAATAGATCAGAGGATGAAGTTCTTGTTCGTGTGTATGGAACCTATAACTACTTGTATGTGGATCCAATGAAATGTCGTTCTGAATTTGAGAATATACTCAAGCAGAATAATTGTAGTTACAGAGAAATATTTCAGAAGGCTCTGGAGCAGGATCTTCCTAGTGCTAAGTGTGGTAGATCGAAGGGGCGAGGATCCAAATCCAAAGAAAGTGCTGAGGAAGTGGAAAGCAAAACCTTTAAAGAGAATGGGGAACTGAAGAAACTCAAACTGAAGAGGCCAAGTGCCAAGTGGGAAGCAAAATGCAAAACCTCTAAGCAAAATGGGGTGCAGAAGGAACCAAAGCCAACTAGCCTGAGCAATGAAGATGATACAAAATGCAGAACCTCTCAGCATAGTGGGGTGCAAAAGAAACACAATCCAAATAGCTTAAGCACTGATGCTAAAAAAGAAGCAAAAAGCAAAACTGTTAAGGATGCAGGGTTGCAGAAAAAACTTGTGCCAAATAGCCCAAGTGCACGCAAGGAAGCGAAAGGAAAAACTCCTAAGCAAGATGTGGTGCAGAAGAAACTTGAGTTGATTGATGCAAAAGAGCAAAGCAATACCCCTACGCAAGATGGTGTACTGCAAAAAAAACGCAGGCCAAGTAGCCAATGCTATGAGGAGGCATCAGAAAGTAAAACCTTGAAACAAGATGGGGCACAAAAGAAACTCAAGCTAAATAGCCCAAGCACTGAGAAGGAAGCAAAAAGGAAAACCTCTAAAAAGGATGACATGCTGAAGAAGCTCAATTCGAATAGCCCATGCACGGCAACATCTTCAACAAGGAAGACTAGTGAAAAAATATCTTCAAGGAAGTCTCACATACTCAATGCACGGAGAATGAGAGTTATGCGGAGCCTTGGTCTCACTGCTCCTTCTGGATCTCCGTTTGATAGAAATGGACATACTTAG | 1137 | 0.4239 | MKGKRLASSKSHVVKEEEEKAADQLRGKVLPGDLIWVRLRGLSWWPAQVVNENAVSRSNKPGNRSEDEVLVRVYGTYNYLYVDPMKCRSEFENILKQNNCSYREIFQKALEQDLPSAKCGRSKGRGSKSKESAEEVESKTFKENGELKKLKLKRPSAKWEAKCKTSKQNGVQKEPKPTSLSNEDDTKCRTSQHSGVQKKHNPNSLSTDAKKEAKSKTVKDAGLQKKLVPNSPSARKEAKGKTPKQDVVQKKLELIDAKEQSNTPTQDGVLQKKRRPSSQCYEEASESKTLKQDGAQKKLKLNSPSTEKEAKRKTSKKDDMLKKLNSNSPCTATSSTRKTSEKISSRKSHILNARRMRVMRSLGLTAPSGSPFDRNGHT* | 379 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi18g0563 | 378 | MobiDBLite | consensus disorder prediction | 178 | 192 | - | - | |
| Vvi18g0563 | 378 | MobiDBLite | consensus disorder prediction | 124 | 139 | - | - | |
| Vvi18g0563 | 378 | MobiDBLite | consensus disorder prediction | 116 | 139 | - | - | |
| Vvi18g0563 | 378 | CDD | PWWP | 32 | 112 | - | - | |
| Vvi18g0563 | 378 | Pfam | PWWP domain | 32 | 112 | IPR000313 | - | |
| Vvi18g0563 | 378 | ProSiteProfiles | PWWP domain profile. | 31 | 93 | IPR000313 | - | |
| Vvi18g0563 | 378 | MobiDBLite | consensus disorder prediction | 258 | 273 | - | - | |
| Vvi18g0563 | 378 | SUPERFAMILY | Tudor/PWWP/MBT | 28 | 144 | - | - | |
| Vvi18g0563 | 378 | MobiDBLite | consensus disorder prediction | 162 | 177 | - | - | |
| Vvi18g0563 | 378 | Gene3D | - | 16 | 121 | - | - | |
| Vvi18g0563 | 378 | MobiDBLite | consensus disorder prediction | 276 | 295 | - | - | |
| Vvi18g0563 | 378 | MobiDBLite | consensus disorder prediction | 204 | 221 | - | - | |
| Vvi18g0563 | 378 | MobiDBLite | consensus disorder prediction | 158 | 378 | - | - | |
| Vvi18g0563 | 378 | MobiDBLite | consensus disorder prediction | 324 | 339 | - | - | |
| Vvi18g0563 | 378 | PANTHER | ALDOLASE-RELATED | 8 | 111 | - | - | |
| Vvi18g0563 | 378 | MobiDBLite | consensus disorder prediction | 237 | 257 | - | - | |
| Vvi18g0563 | 378 | MobiDBLite | consensus disorder prediction | 302 | 323 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vvi18g0563 | Vvi-Chr18 | 5674196 | 5679787 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi18g0563 | - | - | vvi:100250519 | 711.835 |