Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0550 ATGGAGGTCGAGGTTTCAGGTTCCAAATCCTCGTCTGGCGATGTTCCCAAGGTGGAAAAGGATCGGGTTCTCGTGAAGAGGAAGACCTTGCAGGCTGTGCTCGAGCAATGTCAAAGAGCTCTCGAATTGCTCGAAAACACTGGTGACGTCCTCGACGGCGATGACGAAGATGATGCCGTTGATGGTGCCGAGGTGGAGGCCGAGGGTGACGGTTCTGCTTCTCCCTGCCGCGACCGGGAGGCCGATGAGTTGTGTGATCTTCTCAAATCTAGATTGGAATGCCCCGATTTCCTCGAAAAGCTCGAGAGTGCCCAGGTTTCAGTTCCACAAAATATTTCTGCCGAAGAAGGCAGCTCTTGGGACATGATCAATGATAATGATCTATGGGAAGGTGGAATTAGTGACCTGGACCAAGAAAATTATGTTCTTGTTAGGCAAGAGGATATAGTGGAGGGCATTGCGTGCTTCATGGCTGCATATCTGTTGTCCCTAAAACAGACTAAGGAATTAACTCCTAATCAACTTCAGGAAGCCCTGAGCAAAACATTCTCTGTAAAAAAGAAAAAGGGAAAGCTTCGGAAGGCATGGGATGGGAGCAAAGTCATTTATAATGTAGCATCCTGGGGGGCAACTGCCATCGGGATATACCAAAACCCAGCACTACTTAGGGTTGCCTCTGCAGCCTTCTGGACCTCTTGTCGAGTGATATCAAAGCTTTTCTAG 723 0.4882 MEVEVSGSKSSSGDVPKVEKDRVLVKRKTLQAVLEQCQRALELLENTGDVLDGDDEDDAVDGAEVEAEGDGSASPCRDREADELCDLLKSRLECPDFLEKLESAQVSVPQNISAEEGSSWDMINDNDLWEGGISDLDQENYVLVRQEDIVEGIACFMAAYLLSLKQTKELTPNQLQEALSKTFSVKKKKGKLRKAWDGSKVIYNVASWGATAIGIYQNPALLRVASAAFWTSCRVISKLF* 241
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0550 240 PANTHER RING FINGER PROTEIN 1 240 - -
Vvi18g0550 240 Coils Coil 27 47 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi18g0550 Vvi-Chr18 5540027 5544627 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0550 - - vvi:100267834 422.55