Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0549 ATGTTTACAGAAGGTCTTGACAAGAATGCAGTTCGATGGGTCAGGGAGAAGGAGCTTTCACACTCGATTTCGAACCCGATTCATCGGATAGATCCGGTTCGAGGTGCGGGTCGGGGGTTCGGGCTGCCACCGCCATCTAAATTCCGGAGTGGGCACTTGCCATCGAGCACAATTCCGGTGTCCAGAACTATTCCTGGTGATAATGATGATATTGAGTCAGGCTCAGACAATGACAATGATCTAACCACAGATTCGGAAGAGGAGGTTTATGGTGGAAGGTACTCTCTGGATTCATCGCCACCAGATAACAGGATTCCGAGCAATGCTGCTCATGGATATGGGAAGCCCTCACAAGGTCAGCCGCGTTATGCAAGTGATTCCATGTATTCAGATGTTAGTTCTTCAATGGATGTTAGTTCTTCAATGGAGACTGTGGGGCGAGGGTATGGGAATGTGGCTGAGAGATTGCTAAGGGGAAATGGAAGGTACCCAGTTGCGCAGAATGGTAATGGTTTCACGGAGGATGAGTCATCAGATTCTGCCGCTAGTTCAGAATTTTCAACAACTCAAGTGGGGAGCATTAATGGTGGTTTGCCTCGGAGAGGATCGTATGCTTCTGAGGGATACACATCCAGTGTTCCTTCCTGGGTGAATGCAGGAAGGGCCACCAAAAAGGATTCACATGCCAAAACCCTGCCAAAAGAGAGTTTTTCTGATGGTGATGACGATGTTCCCAGTGCACCTCCCTTCTGTGGTTCAGGTCAGAAAATTAACGAAAGTGCCAAGCAAGTTTCACCCTCTGGAGAACAGAGCAAACCTTGTGCAGCAGGTTCACATGGGTTCTCAACTAAAAATGGGCCAGATACATTAAGAAGTGTGCCTGGATTTAATTCAGAGGATAAAACTGGAATGGGGGTTCCTGACAAGTTTGTGAGAACTACTGCTAGTGCTGAAGCTGATGTGCCCTCTAGTTCTCACCCTGCTCGCCTCCCTACATTTCATGCGAGCGCTCAGGGGCCATGGCATGCCGTGATCGCATATGATGCATGTGTACGACTTTGCCTTCATGCTTGGGCAGGGGGGTGCATGGACGCTCCCATGTTTCTGGAAAGTGAATGTGCTCTGTTGCGAAATGCATTTGGTTTGCAGCAAGTGTTATTACAATCAGAGGAGGAACTATTGGTGAAGCGCTCTTCAGAACTTGCTAGTGAGGGAACTGTACCAAAACCTAAGAAAATTATTGGGAAGATGAAGGTGCAAGTTCGTAAGGTGAAAATGTCCCTGGACCCACCCAGTGGCTGCAGCATGTCATCTTTAAGGGCACCAACGATAAAACTGGAATCACTCCGATATCGATTATCCAATTTGCGGTCAACATTCTCTTCTGGATGGCAAGCACTTCGGAGGATTCATGTTGTGCCTCGTATACCTGCAAATGGTTCTTTCTCAAGAAAGAGCTTGGCATATGTGCATGCCAGTAGTCAGTATATAAAACAGGTGTCTGGGCTCCTGAAAACTGGTGTAACAACTCTACGCAGCAGTCCATCATCTTACGAAGGTGTACAAGAAACATACTCTTGTATGTTGAGATTGAAAAGTTCAGTTGAAGAGGATGCCATCCGAATGCTACCTGGATCTGGTGAAACCCATGTCTTCTTTCCAGATAGTCTAGGAGATGATCTGATCCTTGAAGTTAAGGACTCCAAGGGGAAGTATTTTGGTCGTGTCCTTGCTCAAGTGGCTACTATTGCTGAAGATCCAGGTGACAAACTACGTTGGTGGTCTATTTATCATGAGCCAGAGCATGAACTTGTTGGGAAAATACAACTCTACATAAATTATTCAACAAGTTTGGATGAAAATAACCTTAAGTGTGGCTCTGTAGCCGAAACTGTGGCATATGACCTGGTACTTGAAGTTGCCATGAAAATTCAGCATTTTCAACAGAGAAATTTATTAATCCATGGGCCCTGGAAGTGGTTACTGACCGAGTTTGCATCATATTATGGTGTTTCTGATGTATACACCAAGCTGAGGTATTTATCTTATGTCATGGATGTGGCTACACCTACAGCTGACTGTCTGACCTTAGTATATGATTTGTTGTTGCCTGTCATCATGAAGGGCCACAGTAAGAGTACATTGAGTCATCAAGAGAACCGAATCTTAGGAGAAATCAAGGATCAAACTGAACAGATCCTTGCATTAGTTTTTGAGAATTATAAGTCACTTGATGAGTCATCTGCTTCTGGGATTATAGATGCTTTCAGGCCAGCAACTGGTCTTGCTGCTCCTGTGTTGGAACCTGCTGTAAAGCTGTACACACTTCTTCATGACATCTTATCTCCTGAAGTACAAAATCATCTATGCCACTATTTCCAGGCTGCTGCAAAGAAAAGATCAAGAAGGCACTTGGCTGAGACTGACGAGTTTGTTTCCAACAATAGTGAAGGCAGTATACTTGATGCACTTACAGTTTCCATTGCCTACCAGAAGATGAAATCTCTTTGCTTGAACATTCGAAATGAAATTTACACTGATATAGAGATCCACAACCAACATATACTTCCCAGTTTTATAGACCTTCCAAATCTGTCTTCATCCATATATAGCACAGAGCTTTCCAGTAGATTGCGAGCCTTTCTCATTTCATGCCCTCCACCAGGCCCTTCACCTCCTGTAACAGAACTTGTCATCGCAACAGCAGATTTTCAGAGGGATCTTGCGAGCTGGAACATAAATCCTGTCAAAGGTGGAGTTGATGCTAAAGAGTTGTTCCACTTGTATATTGTCATCTGGATTCAAGATAAGCGCCTCTATTTGCTTGAATCATGCAAATTAGACAAGGTAAAATGGTCAGGGGTCAGAACTCAACATTCTACTACTCCTTTTGTTGATGATATGTATGATCGAGTGAAAGAGACTCTGAACGATTATGAAGTCATCATTTCTCGGTGGCCAGAATATACCTTCGTTTTGGAGAATGCTATTGCTGATGTGGAGAAGTCAATAGTGGATGCTTTAGAGAAGCAGTATGCAGATGTTTTACTGCCGTTGAAGGAAAATTTGGCACCTAAGAAATTTGGCCTTAAATATGTTCAAAAGCTTGCTAAACGATCTGTGTGTCAGTACATTGTCCCTGATGAGCTTGGAATTCTTTTGAATTCCATGAAGAGGATGCTCGATGTATTGCGCCCCAAGATAGAAACTCAGATCAAGTCATGGGGTTCTTGTATCCCTGATGGTGGAAATACAGCACCTGGAGAGCGCCTCAGTGAAGTAACAGTGATGCTAAGAGCCAAATTTAGAAACTACCTGCAAGCGGTTGTGGAAAAACTTGCTGAGAATACAAGGTTGCAGAGTGCTACAAAATTGAAAAAGATACTCCAGGAATCAAAGGAAACTGTGGGTGAATCAGATGTACGAAGTAGAATGCAACCACTGAAAGACATGCTGATTGAAACAATAAATCACCTTCATACGGTCTTAGAGACTCATGTCTTTATTGCAACATGTCGGGGCTATTGGGACCGAATGGGACAAGACATTTTAAGTTTCTTGGAGAACAGGAAGGAAAATAGATCTTGGTATAAAGGTTCACGGGTTGCAGTATCGATTCTGGATGACATCTTTGGATCACAGCTGCAGCAGCTGCTGGGTAATGCACTGCAAGAGAAGGATGTAGAGCCACCAAGATCTATTATGGAAGTGCGGTCAATGCTGTGCAAGGATGTTCCGAATCACAAGGACAACACTTACTATTATTAG 3768 0.4398 MFTEGLDKNAVRWVREKELSHSISNPIHRIDPVRGAGRGFGLPPPSKFRSGHLPSSTIPVSRTIPGDNDDIESGSDNDNDLTTDSEEEVYGGRYSLDSSPPDNRIPSNAAHGYGKPSQGQPRYASDSMYSDVSSSMDVSSSMETVGRGYGNVAERLLRGNGRYPVAQNGNGFTEDESSDSAASSEFSTTQVGSINGGLPRRGSYASEGYTSSVPSWVNAGRATKKDSHAKTLPKESFSDGDDDVPSAPPFCGSGQKINESAKQVSPSGEQSKPCAAGSHGFSTKNGPDTLRSVPGFNSEDKTGMGVPDKFVRTTASAEADVPSSSHPARLPTFHASAQGPWHAVIAYDACVRLCLHAWAGGCMDAPMFLESECALLRNAFGLQQVLLQSEEELLVKRSSELASEGTVPKPKKIIGKMKVQVRKVKMSLDPPSGCSMSSLRAPTIKLESLRYRLSNLRSTFSSGWQALRRIHVVPRIPANGSFSRKSLAYVHASSQYIKQVSGLLKTGVTTLRSSPSSYEGVQETYSCMLRLKSSVEEDAIRMLPGSGETHVFFPDSLGDDLILEVKDSKGKYFGRVLAQVATIAEDPGDKLRWWSIYHEPEHELVGKIQLYINYSTSLDENNLKCGSVAETVAYDLVLEVAMKIQHFQQRNLLIHGPWKWLLTEFASYYGVSDVYTKLRYLSYVMDVATPTADCLTLVYDLLLPVIMKGHSKSTLSHQENRILGEIKDQTEQILALVFENYKSLDESSASGIIDAFRPATGLAAPVLEPAVKLYTLLHDILSPEVQNHLCHYFQAAAKKRSRRHLAETDEFVSNNSEGSILDALTVSIAYQKMKSLCLNIRNEIYTDIEIHNQHILPSFIDLPNLSSSIYSTELSSRLRAFLISCPPPGPSPPVTELVIATADFQRDLASWNINPVKGGVDAKELFHLYIVIWIQDKRLYLLESCKLDKVKWSGVRTQHSTTPFVDDMYDRVKETLNDYEVIISRWPEYTFVLENAIADVEKSIVDALEKQYADVLLPLKENLAPKKFGLKYVQKLAKRSVCQYIVPDELGILLNSMKRMLDVLRPKIETQIKSWGSCIPDGGNTAPGERLSEVTVMLRAKFRNYLQAVVEKLAENTRLQSATKLKKILQESKETVGESDVRSRMQPLKDMLIETINHLHTVLETHVFIATCRGYWDRMGQDILSFLENRKENRSWYKGSRVAVSILDDIFGSQLQQLLGNALQEKDVEPPRSIMEVRSMLCKDVPNHKDNTYYY* 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0549 1255 MobiDBLite consensus disorder prediction 223 241 - -
Vvi18g0549 1255 MobiDBLite consensus disorder prediction 166 196 - -
Vvi18g0549 1255 MobiDBLite consensus disorder prediction 71 85 - -
Vvi18g0549 1255 PANTHER PESTICIDAL CRYSTAL CRY8BA PROTEIN 1 1254 - -
Vvi18g0549 1255 MobiDBLite consensus disorder prediction 256 296 - -
Vvi18g0549 1255 MobiDBLite consensus disorder prediction 160 306 - -
Vvi18g0549 1255 MobiDBLite consensus disorder prediction 28 144 - -
Vvi18g0549 1255 MobiDBLite consensus disorder prediction 120 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0549 Vvi-Chr18 5518439 5534757 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0549 - - vvi:100254008 2467.96