Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0543 ATGGCATCAACGCTCTGCTGTAAAGCATCCTCGATCGTCTCCTCGTCCGCAGTACGACGTCGTTTGCCCTTGGTAGGGGCATTTTGCATGCTCAGTTTGGGCCTCTCCAATCTCTGCCCTGCCCTCTCCTCCTCCCTCAAGACGGGTTGTGCTCAGTCTCTCCCTTTTGGGCCCTTTCTCCGCTCAAAGTTTGGTAATCAGACGCCAGCTAAAAGCGTTCGCTCGATCAGAATGGAAGCAAATCAGACTACCGTACCCAGTATTGTCGTTTATGTTACTGTCCCGAACAAAGAAGCGGGAAAGAAGTTAGCAGAAAGCATAGTTAAAGAGAAGCTTGCAGCCTGTGTTAACCGAGTACCAGGTATTGAATCAGTTTATCATTGGCAGGGAGAGATCCAGACAGATTCTGAGGAACTACTTATAATCAAGACCAGGGAATCTCTCTTGGAAGCTCTAACAGAGCATGTTAAAGCAAATCATGAATATGACATGCCCAGGAATATAGCAGCTTTGAGCGGCTTTGGTAGTATGGCAGAATGTAGAAATCCTTGTGTAGCCAGCAGTTCTCAACAGTCTTCAAACCACTTTTGA 591 0.4721 MASTLCCKASSIVSSSAVRRRLPLVGAFCMLSLGLSNLCPALSSSLKTGCAQSLPFGPFLRSKFGNQTPAKSVRSIRMEANQTTVPSIVVYVTVPNKEAGKKLAESIVKEKLAACVNRVPGIESVYHWQGEIQTDSEELLIIKTRESLLEALTEHVKANHEYDMPRNIAALSGFGSMAECRNPCVASSSQQSSNHF* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0543 196 Pfam CutA1 divalent ion tolerance protein 88 169 IPR004323 GO:0010038
Vvi18g0543 196 Gene3D - 78 176 IPR015867 -
Vvi18g0543 196 PANTHER DIVALENT CATION TOLERANCE CUTA-RELATED 34 169 IPR004323 GO:0010038
Vvi18g0543 196 SUPERFAMILY GlnB-like 87 169 IPR011322 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0543 K03926 - vvi:100252419 314.694