Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0539 ATGGAGACAACCAATTTTCACGATAGCAACCTCTATAATTTCGTTGACGGCAGAAGCATCGATTTTCGCCATGATGTTAGTCGCAGTTTGCAAATGCACTCATCACTGTTACGACGGCTCACCCAGGAGGGAGAATTGGAGGGGCACCAGGGTTGTGTGAACACTGTGGCCTGGAACTCAAGAGGCTCACTTTTGATATCTGGATCTGATGACACAAGGGTAGGTGAGGTTGAGGTTGGAGAAGATGCAGAAGGATTTTCTTTGGGGTGGTGGGGCTTTTGTGTAGAAGCCACATCTAATAAGGTGGAAAACGGTCTTTTTAGAGAAAAAAGCCGGGAGGATTGGGTGTGA 351 0.4729 METTNFHDSNLYNFVDGRSIDFRHDVSRSLQMHSSLLRRLTQEGELEGHQGCVNTVAWNSRGSLLISGSDDTRVGEVEVGEDAEGFSLGWWGFCVEATSNKVENGLFREKSREDWV* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0539 116 Gene3D - 17 75 IPR015943 GO:0005515
Vvi18g0539 116 ProSiteProfiles Trp-Asp (WD) repeats profile. 46 74 IPR001680 GO:0005515
Vvi18g0539 116 SUPERFAMILY WD40 repeat-like 44 73 IPR036322 GO:0005515
Vvi18g0539 116 SMART WD40_4 39 78 IPR001680 GO:0005515
Vvi18g0539 116 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 8 74 IPR045151 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0539 K11807 - vvi:100255806 150.599