Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0526 ATGGCCCAGTGCATACCAGGCTTAAACCATCCCAAAACCCTCAGCGGCAACGTCTTGTCTTCCATATCCTACTGCAAAACAGGGCCAAGATGGATTAAATTCCTAACAATGTCAAGCCAACAGCACCAATCTCAGCAATTATCTCTTGATGCCTTAATCAGCAGTAATCGCAAAGAAGAGGTTATCGGCGCCGTTCGCCACTCGCTCTCCAATTGTCTCTCCGAAACGAACCTTCATCTCACAGTTCCCGCTCTTAAGTCTAAAACTAGAGGCAAGGTTAGAGATGTCTATGATGGCGGGGATTATCTAGTCCTTGTCACAACAGATCGCCAGAGTGCATTTGATAGAGTTCTTGCTTCTATTCCATTCAAAGGCCAGGTTCTTAATGAGACAAGTTTGTGGTGGTTTGATAAAACTCAGCACATAGCTCCAAATGCAGTTGTGTCGGCTCCTGATAAAAATGTCACAATTGCAAAGAAATGTTCAGTTTTTCCTGTTGAATTTGTTGTCAGAGGTTATGTGACTGGAAGTACTGATACATCATTATGGACTGTCTACAAGAATGGTGTCCGAAACTACTGTGGCAATGCCCTCCCAGATGGCATGGTAAAAAACCAAAAGCTTCCTGCAAATATACTCACACCTACAACCAAGGCTGCAGATCATGATGTCCCCATAGCTCCTGATGAGATAGTTAAACTTGGGTTGATGACTCAAGCTGACTATGATGAAGTGAGTAGGAAAGCATTAAGCTTATTTGAATACGGTCAGCATGTGGCTTTGGAACATGGCCTGATATTGGTAGACACAAAATATGAATTTGGAAAGGGATCTGATGGTACAGTTCTTTTGATTGACGAGGTCCATACTCCTGATTCAAGTAGATATTGGATTGCTAATTCTTATGAGGAACGCTTTAGGAACGGCATTGAACCTGAAAATGTTGACAAGGAGTTCTTGAGGTTGTGGTTCAGAGAGCACTGTAATCCATATGAGGATGAGGTTCTTCCTGATGCTCCCACGGAACTTGTTAGTGAATTGGCTTGGCGAATATGGAAGAGTATCAAAGGTGCGCCAAAGATAAAAGAATAA 1092 0.4277 MAQCIPGLNHPKTLSGNVLSSISYCKTGPRWIKFLTMSSQQHQSQQLSLDALISSNRKEEVIGAVRHSLSNCLSETNLHLTVPALKSKTRGKVRDVYDGGDYLVLVTTDRQSAFDRVLASIPFKGQVLNETSLWWFDKTQHIAPNAVVSAPDKNVTIAKKCSVFPVEFVVRGYVTGSTDTSLWTVYKNGVRNYCGNALPDGMVKNQKLPANILTPTTKAADHDVPIAPDEIVKLGLMTQADYDEVSRKALSLFEYGQHVALEHGLILVDTKYEFGKGSDGTVLLIDEVHTPDSSRYWIANSYEERFRNGIEPENVDKEFLRLWFREHCNPYEDEVLPDAPTELVSELAWRIWKSIKGAPKIKE* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0526 363 ProSitePatterns SAICAR synthetase signature 2. 267 275 IPR018236 GO:0004639|GO:0006164
Vvi18g0526 363 Gene3D - 165 308 - -
Vvi18g0526 363 PANTHER PHOSPHORIBOSYLAMINOIMIDAZOLE-SUCCINOCARBOXAMIDE SYNTHASE 1 351 - -
Vvi18g0526 363 FunFam Phosphoribosylaminoimidazole-succinocarboxamide synthase 163 313 - -
Vvi18g0526 363 Gene3D Phosphorylase Kinase; domain 1 75 164 - -
Vvi18g0526 363 CDD SAICAR_synt_Sc 90 350 - -
Vvi18g0526 363 ProSitePatterns SAICAR synthetase signature 1. 163 177 IPR018236 GO:0004639|GO:0006164
Vvi18g0526 363 Pfam SAICAR synthetase 89 334 IPR028923 -
Vvi18g0526 363 FunFam Phosphoribosylaminoimidazole-succinocarboxamide synthase 75 167 - -
Vvi18g0526 363 Hamap Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 85 353 IPR028923 -
Vvi18g0526 363 SUPERFAMILY SAICAR synthase-like 79 349 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0526 K01923 - vvi:100250537 707.983