Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0520 ATGGAAGCTCAGCTGAGCAGCAACATGAGGAAGGCTCTGCTGGTTCTGAATTGTGTCATTCTCTCAATTGGAAACTGCGGTGGTCCCATGGTGATGCGCCTGTATTTCGTCCGTGGCGGCGAGAGAATATGGTTTTCCAGTTGGTTGGAAACGGCTGGGTGGCCCTTGATCCTAGTCCCTCTCATCATCACTTACATCCACCGCCGAACCAAGCAAGGCTCCCATGCCAAGCTCTTCTTCATGAAACCTCCTCTGTTCGTGGCCTCCGCTGTTATCGGTGTCCTCACCGGCTTCGATGACTACCTCTACGCCTATGGCGTAGCAAAACTGCCCGTTTCAACATCTGCTCTCATTATCGCAAGCCAGCTCGCTTTCACAGCAGCCTTCGCGTTCCTCTTGGTGAAACAAAAGTTCACCTCATACTCCGTAAATGCCATATTTCTGTTGAGTATCGGTGCCGGTGTCTTGGCTTTACACACTAGCTCCGACCGCCCTGCTAATGAGTCCAACAAAGAATATTACCTCGGGTTTGTCATGACACTTGCAGCTGCAGCGCTCTATGGTTTCATTCTCCCCTTGGTTGAATTAACCTACAAGAAAGCAAAGCAGGCAATAACCTACTCACTGGTCATGGAGATTCAAATGGTGATGTGCTTCTTCGCCACCGTCTTTTGCACAGTGGGGATGCTGGTTAATAATGACTTTCAGGCAATTTCCAGAGAAGCAAAAGAATACGAGCTTGGAGAAGCTAAATATTATCTGGTGGTGGTATGGAATGGGATCATATGGCAGTGTTTCTTCTTAGGAGCAATAGGAGTCATCTTTAGCGCTTCATCTTTGGTATGCGGTATTGTGATTGCTGTCCTACTCCCCGTGACAGAGATCTTGGCTGTTATTTTCTTCCAAGAAAAATTTCAAGCAGAGAAGGGGGTTTCACTGGCTCTCTCTCTGTGGGGCTTTGTTTCCTACTTCTACGGCGAGATAAAGGATAGCAAGAAAAAGAAGAATCCCACTCCGGAGACGGAGCTGCCTCAAACGGTCAATCCATGA 1050 0.4829 MEAQLSSNMRKALLVLNCVILSIGNCGGPMVMRLYFVRGGERIWFSSWLETAGWPLILVPLIITYIHRRTKQGSHAKLFFMKPPLFVASAVIGVLTGFDDYLYAYGVAKLPVSTSALIIASQLAFTAAFAFLLVKQKFTSYSVNAIFLLSIGAGVLALHTSSDRPANESNKEYYLGFVMTLAAAALYGFILPLVELTYKKAKQAITYSLVMEIQMVMCFFATVFCTVGMLVNNDFQAISREAKEYELGEAKYYLVVVWNGIIWQCFFLGAIGVIFSASSLVCGIVIAVLLPVTEILAVIFFQEKFQAEKGVSLALSLWGFVSYFYGEIKDSKKKKNPTPETELPQTVNP* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0520 349 PANTHER OS09G0467300 PROTEIN-RELATED 8 336 IPR030182 GO:0015211|GO:0016020
Vvi18g0520 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 81 160 - -
Vvi18g0520 349 Pfam Purine nucleobase transmembrane transport 13 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0520 Vvi-Chr18 5169811 5170958 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0520 9 336 Organic Solute Cotransporters AT1G28220 59.697 4.39e-156 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0520 - - vvi:100245407 680.633