Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0519 ATGGAGGTTGAAGCTCAGCTGAGCAGCAACACGAGGAAGGCTCTGCTGGTTCTGAGTTGTGTGATTCTCTCAATTGGACACTGCGGTGGTCCCTTGGTGATGCGCCTATACTTCGTCCGTGGCGGCGAGAGGATATGGTTTTCCAGTTGGTTGGAAACGGCTGGGTGGCCCTTGATCCTAGTCCCTCTCATCATCACTTACATGCACCGCCGAACTAAGCAAGGCTCCCATGCCAAGCTCTTCTTCATGAAACCTCCTCTGTTCGTAGCCTCCGCTGTTATCGGTGTCCTCACCGCCCTCGATGACTACCTCTACGCTTATGGCGTAGCAAAACTGCCCGTTTCAACAATTGCTCTCATCATCGCAAGCCAGCTCGCTTTCACAGCAGCCTTCGCATTCCTCTTAGTGAAACAAAAGTTCACCTCATACTCCGTAAATGCCATATTTCTCTTGAGTATTGGTGCTGGTGTCTTGGCTCTACACACTAGCTCCGACCGCCCTGCTAATGAGTCCAACAAAGAATATTACCTCGGGTTTTTCATGACACTTGCAGCTGCAGCGCTCTATGGTTTCATTCTCCCCCTGGTTGAATTAACATACAAGAAAGCAAAGCAGGCAATAACCTACTCACTGGTCATGGAGATTCAAATGGTGATGTGCTTCTTCGCCACCTTCTTTTGCACAGTGGGGATGCTGGTTAATAATGACTTTCAGGCAATTCCCAGAGAGGCAAAAGAATACGAGCTTGGAGAAGCTAAATATTATCTGGTGGTGGTATGGAATGGGATCATGTGGCAGTGCTTCTACTTAGGAGCAATAGGAGTCATCTTTTGCGCTTCATCTTTGGTAGCCGGTATTGTGCTTGCTGTCCTACTCCCCGTGACTGAGATCTTGGCTGTTATTTTCTTCCACGACAAATTTCAAGCAGAGAAGGGGGTTTCACTTGCTCTCTCTCTTTGGGGTTTTGTTTCATACTTCTACGGCGAGATAAAGGATAGCAAGAAAAAGAAGAATCCCACTCCGGAGACGGAGCTGCCTCAAACAGTCAATCCATGA 1056 0.483 MEVEAQLSSNTRKALLVLSCVILSIGHCGGPLVMRLYFVRGGERIWFSSWLETAGWPLILVPLIITYMHRRTKQGSHAKLFFMKPPLFVASAVIGVLTALDDYLYAYGVAKLPVSTIALIIASQLAFTAAFAFLLVKQKFTSYSVNAIFLLSIGAGVLALHTSSDRPANESNKEYYLGFFMTLAAAALYGFILPLVELTYKKAKQAITYSLVMEIQMVMCFFATFFCTVGMLVNNDFQAIPREAKEYELGEAKYYLVVVWNGIMWQCFYLGAIGVIFCASSLVAGIVLAVLLPVTEILAVIFFHDKFQAEKGVSLALSLWGFVSYFYGEIKDSKKKKNPTPETELPQTVNP* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0519 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 83 162 - -
Vvi18g0519 351 Pfam Purine nucleobase transmembrane transport 15 335 - -
Vvi18g0519 351 PANTHER OS09G0467300 PROTEIN-RELATED 9 338 IPR030182 GO:0015211|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0519 Vvi-Chr18 5163282 5164450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0519 13 338 Organic Solute Cotransporters AT1G28220 57.622 8.27e-151 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0519 - - vvi:100267723 687.567