Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0511 ATGCAAATAGAGATCTCCTCAAGTCATCCTGCTTTCTATCGTGGAGGAGAACACATTTTCTTACAGCCCCAACTCCATTCCACAGGTCCCAAGTGTGGACTTTTTCACTACTCACTACTGGTACCCCTGATCAACAATCCAAAGTCATCCAAGTCATGGCCCACTCATAGATCTCCTCAGCCCATCCTGCTTTCGAATATGGAGAAGATCAAATCCCTTCCTACTACCCCGTTTTCAGACCCCCACAACTCCATGGCACAAGTCCCAACGGTGGACTTTTCGCTCCTCACTGTTGGTACCCCTAATCAACGATCCAAAGTCATCCAACTCCTCGGCCACGCATGTCGAGAATGGGGATTTTTTGTGGTAACAAATCACAACATGCCAAGGACGCTGATGGACGAGATGTTGAAAGTAGGTAAAAGGTTCTTTGATCTAACGGATGAGGAAAAGCGAGAGTATGCAGGAAAACAAGTACTTGATTCAATAATTTGTGGAAAACATCTCCAGAGGGAGTTCCTTAAGAGAGATTACAAAAGCATACTGCAAAATAGCTCGGGAAGTGGCTGGAGAATTACTAAAAGGAATTTCAAAAAGCTTGGGATTGGAAAAGAGCTACATAAATGA 627 0.4434 MQIEISSSHPAFYRGGEHIFLQPQLHSTGPKCGLFHYSLLVPLINNPKSSKSWPTHRSPQPILLSNMEKIKSLPTTPFSDPHNSMAQVPTVDFSLLTVGTPNQRSKVIQLLGHACREWGFFVVTNHNMPRTLMDEMLKVGKRFFDLTDEEKREYAGKQVLDSIICGKHLQREFLKRDYKSILQNSSGSGWRITKRNFKKLGIGKELHK* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0511 208 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 83 174 - -
Vvi18g0511 208 SUPERFAMILY Clavaminate synthase-like 70 158 - -
Vvi18g0511 208 Gene3D - 55 186 IPR027443 -
Vvi18g0511 208 Pfam non-haem dioxygenase in morphine synthesis N-terminal 88 158 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0511 Vvi-Chr18 5035063 5039911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0511 64 154 Glycosyltransferase AT5G59530 29.787 2.32e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0511 - - vvi:100264331 128.257