Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0510 ATGTCGGGAATGGGGATTTTTTATGGCGAAAGGTTCTTTGATCTCGCCGAGGAGGAAAAGCAAGACCATGCAGGAAAAGAATTGTTTGATCCAATAAGGTGTGGAACAGGCTTTAATAACGGACTGGGCAATGTGTTTCTCTGGAGGGATTATCTCAAGGTTCATGTTCATCCCCACTTTCATGCTCCTCACAAACCCGCTGATTTCAGAGAGACTTCAGAAGAATACTGCAAAAAAGCTCGAGACGTGGCTGAAGAATTGCTAAAAGGGATATCCAAAAGCTTGGGGCAGGAAGAAAACTACATACATAAGAAAATGGATGTAGAATCAGGATCGCAGCTGCTTGTTATGAATCTTTATCCACCATGCCCGCGGCCAGAACTTGTAATGGGGATGCCCCCTCATTCGGATCATGGCATCTTGACACTCCTGATGCAGAATGATGTGTGTGGCCTTCAAATTCTACACAACGGCAAGTGGGTGCCCGTCAACCCCCCTCCTTATTCTTTTCTTGTCAACACAGGGGATCATATGGAGATACTGACAAATGGGCGGTACGAAAGTGTGGTGCACCAAGTTGTGGTGAATAGCAATGCCACAAGGATGACCATAGCAACAGGACATGGACCACCACTGGGCGCCATTATAAGCCCAGCAGCAGAGCTGGTAGACAGTGAAAACCATCCCCCAAAGTACCAGGGAATGAAATATAGGGACTACATCGAGCTTCAACAAACCAATCAACTCGAAGGCAAATCCTGCTTGGATCGTGTTCGAATTTGA 783 0.4649 MSGMGIFYGERFFDLAEEEKQDHAGKELFDPIRCGTGFNNGLGNVFLWRDYLKVHVHPHFHAPHKPADFRETSEEYCKKARDVAEELLKGISKSLGQEENYIHKKMDVESGSQLLVMNLYPPCPRPELVMGMPPHSDHGILTLLMQNDVCGLQILHNGKWVPVNPPPYSFLVNTGDHMEILTNGRYESVVHQVVVNSNATRMTIATGHGPPLGAIISPAAELVDSENHPPKYQGMKYRDYIELQQTNQLEGKSCLDRVRI* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0510 260 SUPERFAMILY Clavaminate synthase-like 9 251 - -
Vvi18g0510 260 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 10 240 - -
Vvi18g0510 260 Pfam 2OG-Fe(II) oxygenase superfamily 113 206 IPR044861 -
Vvi18g0510 260 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 110 210 IPR005123 -
Vvi18g0510 260 Gene3D - 8 250 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0510 Vvi-Chr18 5030037 5032098 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0510 48 260 Glycosyltransferase AT5G59530 35.945 5.67e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0510 - - vvi:100264331 531.946