Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0505 ATGTCCTTGGATGAGCGATCCTTTACCCTTTCGATATCAAGAATTGAACCCAAGGGCTTTGGTTGCAACGGCGTGAACCCAGAAGCGAAACCTAAGGTCCGGCAGAACCCAAGTGAACCCCATTTTGGAAAATCACTTGGAATACCTTGTTGTTGCAGTTTCCGAAAATTTGGTTACACAGAGAGGGTACCAAACTTCTGGGTGGATGAAGCACGGGCGAGGAGACTTGCCACTGAAGAGGTTATGATCCTAGACACTCTTCCTGATACTCGTTGCATTAATGAACCATGCTCTGAGAGCAACCTGAATAATTATACCAATTTAGCAAACACTGTACGGGAAAAGGTCAGAGGGGTATCACTGGTTTTGAAGAGTATTACTCAATTATATAATGAGTATGCTGTTCCATTTGAGCTTTGGGAGATACGCCTGGAAATGCTGTATTTTGCTGACTATTCTGGTGATGCTGATAGTAGCATTATAGGAGAGACCTGA 495 0.4384 MSLDERSFTLSISRIEPKGFGCNGVNPEAKPKVRQNPSEPHFGKSLGIPCCCSFRKFGYTERVPNFWVDEARARRLATEEVMILDTLPDTRCINEPCSESNLNNYTNLANTVREKVRGVSLVLKSITQLYNEYAVPFELWEIRLEMLYFADYSGDADSSIIGET* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0505 164 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP155 105 162 IPR004870 GO:0005643|GO:0006913|GO:0017056
Vvi18g0505 164 Gene3D - 82 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0505 Vvi-Chr18 4986570 4987674 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0505 K14312 - vvi:100243944 117.472