Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0501 ATGGCGGGTGTCGGAGTTGTGTGCGTAGTCTTCTTGGTCCTGTGTGCTGTAATGCCAAGTTTGGCGACTGATTATACCGTGGGTGACTCGACCGGTTGGACAATGGGCGCTGATTACAGCACTTGGACTAGCGGGAAGACCTTCGTCGTTGGCGACACTCTTGTATTCAATTATGGAGGGGGACATACTGTGGACGAGGTGAGTGCAAGTGATTATAGCACTTGCACAGTTGGGAATGCTATTACTTCAGATAGCACAGGCGCCACCACAATATCTCTCAAAAAAACAGGCACGCATTACTTCATATGTGGGGTAATTGGACATTGTGGTAGCGGGATGAAGCTTGCTGTTACGGTGGAATCAGGAAAAACCACTGCACCGCCTACCTCGTCGTCCGCAACACCATCTTCCGGTGCCGCCACCACTTCACCTGCGACGCCCACTGCCACTACCACTACCACACCTTCATCTACTGTTGCTCATTCATCTGCAGGGAACGCTTTTTCTCCATTTGTAGCTGTAGTAATCACTTGGCTTGCTTTGTTTTTGTTGGTTTTGTCATGA 564 0.4982 MAGVGVVCVVFLVLCAVMPSLATDYTVGDSTGWTMGADYSTWTSGKTFVVGDTLVFNYGGGHTVDEVSASDYSTCTVGNAITSDSTGATTISLKKTGTHYFICGVIGHCGSGMKLAVTVESGKTTAPPTSSSATPSSGAATTSPATPTATTTTTPSSTVAHSSAGNAFSPFVAVVITWLALFLLVLS* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0501 187 MobiDBLite consensus disorder prediction 124 159 - -
Vvi18g0501 187 Gene3D - 21 126 IPR008972 -
Vvi18g0501 187 FunFam Blue copper 21 125 - -
Vvi18g0501 187 SUPERFAMILY Cupredoxins 22 119 IPR008972 -
Vvi18g0501 187 PANTHER BLUE COPPER PROTEIN 22 139 IPR039391 GO:0009055
Vvi18g0501 187 ProSiteProfiles Phytocyanin domain profile. 23 121 IPR003245 GO:0009055
Vvi18g0501 187 Pfam Plastocyanin-like domain 33 113 IPR003245 GO:0009055
Vvi18g0501 187 CDD Phytocyanin 23 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0501 Vvi-Chr18 4966219 4966892 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0501 32 182 Miscellaneous Gene Families AT1G22480 50.658 3.09e-37 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0501 - - vvi:100243780 304.293