Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0500 ATGGCTTACTCAAGCGTGGTGCTCGTGATGATGTTTGCTTTGGTGGCTGGATCGGCTTTCGCTCAGTCTCCCGCATCGTCACCGACTGCTTCTCCTACTAAGTCGCCAACGGCTTCTCCTCCGGTGGCCACTCCCCCGTCTCCAACACCTTCTCCATCCACCACTCCTTCTGCCCCTGCTCCCGCCCCATCCACCGTATCACCACCAGCCTCTACTCCATCTCCTACATCGGGTTCTCCTCCCGCACCTCCAACGAGTCCTGCTTCGCCACCCACCACTGGTGCCTCACCGTCTCCTTCCATCAGCACTCCTCCCACAGAGCCTCCGTCTCCTAGCGCCGCCGCTTTGAACACGGTCACTTTTACCGGATCTGCAGCCGCGGTCTTCCTTGGTGCTTTCTTGCTGCTCAAGATCTGA 417 0.5947 MAYSSVVLVMMFALVAGSAFAQSPASSPTASPTKSPTASPPVATPPSPTPSPSTTPSAPAPAPSTVSPPASTPSPTSGSPPAPPTSPASPPTTGASPSPSISTPPTEPPSPSAAALNTVTFTGSAAAVFLGAFLLLKI* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0500 138 PANTHER CLASSICAL ARABINOGALACTAN PROTEIN 9 1 135 IPR044959 -
Vvi18g0500 138 MobiDBLite consensus disorder prediction 20 114 - -
Vvi18g0500 138 MobiDBLite consensus disorder prediction 34 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0500 Vvi-Chr18 4962905 4963321 Singletons
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0500 - K00341 vvi:100266097 62.7734