Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0491 ATGCAGAAACGAAGCAGGTGGAGGGGATTGGTGGTGCTGAGGAGGTTGTTGATAGGGGCCATATGTTCGATAGCAGCGGTGGCTCTGCTCTCTGTACACGTACACATTTTCCTTTCATCCAAAGTCCCGGACTTCTCCGACTCCTATAAGCTACCCACGCAACATGAAATTGGGTTCCAGAGGTTGAGCACCGAGCGAAAATGGGTTCAAGAGTTGGCTCCACCCCATTTATCAAAAGCTCCACTGCCTTCTCGCAAGTTGGATGGTGCAAGTGGGATTTTGGATTTGGACAAGCTATGGAAGCCTCCACAAAATCGGGATTTTGTGCCCTGTGTTGACCCTGGTGCAAACTATACATCTCCTGCAGAGTCACAGGGTTACCTGCTCGTTCATACAAATGGTGGGCTCAATCAAATGCGGGCTGGGATATGTGACATGGTAGCTGTAGCCCGCATCATCAATGCCACTCTTGTAATTCCTGAACTTGATAAGCGGTCATTTTGGCAAGACTCTAGTAACTTCTCAGATGTCTTTGATGAAGATCATTTTATTAGCGCTCTAGCTTATGATGTAAAGGTCATAAAAAAGCTCCCCAAGGAACTAGCAACTGCTCCTAGAGCAGTTAAGCATTTTAGAAGCTGGTCTGGTATAGATTATTATCAGAATGAGATAGCTAGCATGTGGGCTGATTATCAGGTTATCAGAGCTGCTAAATCTGATTCTCGTCTGGCAAATAATAACTTGCTTCCAGACATTCAGAAGCTGAGGTGCCGTGCTTGTTATGAAGCCCTCCGTTTTGCACCCCAAATTGAGGCAATGGGAAAATTGTTGGTGGATAGAATGAGGTCCTATGGTCCTTACATTGCTCTACATTTACGATATGAGAAGGACATGCTGGCTTTTAGTGGATGCACGCATGATTTATCCCCCGCTGAAGCTGAAGAACTTAGGATGATCAGAGAAAACACAGCATATTGGAAAGTAAAGGGTATTGATTCCAGGGAACAGAGAGCCAAAGGGTATTGCCCCTTAACTCCAAAGGAGGTTGGAATTTTCCTAATGGCTCTTGGATACCCATCTAGCACTCCCATATATATTGCTGCAGGAGAGATATATGGGGGTGATTCTCATATGGCAGATTTGCAATCTCGTTATCCCATATTAATGAGCAAGGAAAAACTGGCATCCATTGATGAGCTTGAACCGTTTGCTAATCATGCATCTCAGATGGCTGCACTTGATTATATTGTATCAGTTGAAAGTGATGTATTTATTCCTTCGTACTCTGGAAACATGGCAAGAGCAGTTGAGGGTCATCGTCGTTTTTTGGGACACAGGAAAACAATTTCTCCTGACAGGCAAGATTCTCTTGTTCATCTGTTTGACAAAATTGAGCGGGGATCCCTGAAAGAAGGCAAAAACCTATCAAATAAAATTATGGAACTGCACAGAAAAAGGCAAGGGTCTCCAAGAAAAAGAAAAGGCCCCATCTCTGGAACAAAGGGCATGGATAGGTTTCGTTCAGAAGAGGCATTTTACGTGAACCCTATACCAGATTGTTTATGTCACAAGGAGCCCCCAGATATGAACACCTCTATCATTATCAGGTAG 1611 0.442 MQKRSRWRGLVVLRRLLIGAICSIAAVALLSVHVHIFLSSKVPDFSDSYKLPTQHEIGFQRLSTERKWVQELAPPHLSKAPLPSRKLDGASGILDLDKLWKPPQNRDFVPCVDPGANYTSPAESQGYLLVHTNGGLNQMRAGICDMVAVARIINATLVIPELDKRSFWQDSSNFSDVFDEDHFISALAYDVKVIKKLPKELATAPRAVKHFRSWSGIDYYQNEIASMWADYQVIRAAKSDSRLANNNLLPDIQKLRCRACYEALRFAPQIEAMGKLLVDRMRSYGPYIALHLRYEKDMLAFSGCTHDLSPAEAEELRMIRENTAYWKVKGIDSREQRAKGYCPLTPKEVGIFLMALGYPSSTPIYIAAGEIYGGDSHMADLQSRYPILMSKEKLASIDELEPFANHASQMAALDYIVSVESDVFIPSYSGNMARAVEGHRRFLGHRKTISPDRQDSLVHLFDKIERGSLKEGKNLSNKIMELHRKRQGSPRKRKGPISGTKGMDRFRSEEAFYVNPIPDCLCHKEPPDMNTSIIIR* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0491 536 PANTHER OS02G0726500 PROTEIN-RELATED 16 523 - -
Vvi18g0491 536 PIRSF UCP009360 2 526 IPR024709 -
Vvi18g0491 536 FunFam O-fucosyltransferase 28 258 452 - -
Vvi18g0491 536 Pfam GDP-fucose protein O-fucosyltransferase 127 442 IPR019378 -
Vvi18g0491 536 CDD O-FucT_plant 127 448 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0491 Vvi-Chr18 4773405 4779913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0491 17 526 Miscellaneous Gene Families AT1G22460 64.587 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0491 - - vvi:100267809 1061.21