Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0490 ATGGGGGTGTCCTTCCTATCAACAGCTCCGTCTTTGATTCCAATGGCGCCCCAACCATCTTCTACCCCCAGACACTCTCTTCAAGCAGGGAGGATCCGTTGTAACCGAATTGAATGTAATGGAACTGATGAGGATGGATTCCGTCGGAGGGACGTTCTCAAATGCGTGGGTGCCACCCTTGGCATGGAATTACTAGCAAGCTCAGGACCATTTGTTGAAATGGCTGCTGCAGCTGATTTAATACAACTCAGACAACGTTCTGAGTTTCGTTCGAATGTCAAGGGGACCCTTTTTACTGCTATAAAGGGAAATCCTGATATCATCCCATCCCTACTAACTTTAGCACTGAATGATGCCATGACTTATGATAAGGCTACAAAATCTGGAGGCCCAAATGGATCGATACGATTCAGTTCAGAGATAAGCAGACCTGAGAATAAAGGGCTCTCTGCAGCTTTGAATTTATTAGAGGAATCAAAGAAGGAGATAGATTCATATTCCAAGGGAGGGCCAATATCATTCGCAGATCTCATCCAATATGCAGCTCAAAGTGCAGTAAAGTCTACATTTATAGCTTCTGCAGTACGTAAATGTGGTGGGAATGAAGAGAAAGGGAATTTATTATACACAGCATATGGCTCAAATGGGCAGTGGGGGTTGTTCGATAAGCAATTTGGGAGAGCTGACACTCAGGAGCCAGATCCGGAGGGAAGAGTTCCCCAGTGGGAGAAAGCTAGTGTCCAGGAAATGAAAGATAAGTTCACAGCTGTTGGCTTTGGTCCTCGCCAGCTAGCTGTTATGTCTGCATTTTTGGGTCCAGATCAGTTGGCAAGTGAGGCCTTATTAGCCACGGATCCAGATGTTGCTCCATGGGTTCAGAAATACCAACGCAGCCGAGAAACAGTTTCTCAGACTGATTATGAGGTTGATCTTATTACCACTCTCACAAAATTGAGTTGCTTGGGCCAACAAATCAACTATGAGGCATATAGTTACCCTGTCCAAAAGGTTGATTTTAGCAAGCTCAAACTATAG 1035 0.4493 MGVSFLSTAPSLIPMAPQPSSTPRHSLQAGRIRCNRIECNGTDEDGFRRRDVLKCVGATLGMELLASSGPFVEMAAAADLIQLRQRSEFRSNVKGTLFTAIKGNPDIIPSLLTLALNDAMTYDKATKSGGPNGSIRFSSEISRPENKGLSAALNLLEESKKEIDSYSKGGPISFADLIQYAAQSAVKSTFIASAVRKCGGNEEKGNLLYTAYGSNGQWGLFDKQFGRADTQEPDPEGRVPQWEKASVQEMKDKFTAVGFGPRQLAVMSAFLGPDQLASEALLATDPDVAPWVQKYQRSRETVSQTDYEVDLITTLTKLSCLGQQINYEAYSYPVQKVDFSKLKL* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0490 344 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 273 333 IPR044831 GO:0004601|GO:0034599
Vvi18g0490 344 FunFam Thylakoid lumenal 29 kDa protein, chloroplastic 245 309 - -
Vvi18g0490 344 Pfam Peroxidase 95 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vvi18g0490 344 MobiDBLite consensus disorder prediction 1 27 - -
Vvi18g0490 344 Gene3D - 83 244 - -
Vvi18g0490 344 PRINTS Plant ascorbate peroxidase signature 268 293 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vvi18g0490 344 PRINTS Plant ascorbate peroxidase signature 140 164 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vvi18g0490 344 PRINTS Plant ascorbate peroxidase signature 108 123 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vvi18g0490 344 PRINTS Plant ascorbate peroxidase signature 126 136 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vvi18g0490 344 CDD plant_peroxidase_like 93 301 - -
Vvi18g0490 344 Gene3D - 245 309 - -
Vvi18g0490 344 SUPERFAMILY Heme-dependent peroxidases 74 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi18g0490 344 FunFam thylakoid lumenal 29 kDa protein, chloroplastic 76 244 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0490 K00434 - vvi:104882489 682.945