Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0484 ATGGAGAGTTCCCAAGGAAGCCAGAACGAGGCAACGCAGCGTCAAAGAAGGAAGTCTCTGAAGGCAATGTTTCTGGTACTTGTGAACTGTGTCTTGATGACAATTGGCCAAGTAGGTGGCCCCTTGCTTCTAAGGATCTACTATTTGCATGGGGGAAAGAGGAAATGGCTCAATGCTTGGCTGCTCACCTCTGGGTTCCCCATCTTGATCCTCCCAATGGCCTTTTCTTACTTGCGAGCTCAGGCCAAAGGGCAAGCCACCGTATTACTGGTTACGCCTAGGCTTGTTGCTGCCAGTGCCTTCCTGGGAATTCTACTTGGGCTTGATGGTTACCTCTATTCGTTTGGTTTATCTTACCTCCCCATATCGGTTTCTTCCCTTCTTGGTTCAACTCAGCTGGCCTTCACTGCAATTTTCGCTTTTATTGTGGTGAAGCATAAGTTCACACATTACTCGGTAAATGCAGTGGTGTTAATGACCTTCGGATCAATCGTTCTTGGGCTTCACATGAATGGAGATCGCCCGAGTGGGGTGTCTGATGGGAAGTATTTGCTGGGTTTTTTAATGACCCTCGGCGCTGCTGCCCTTCATGGGTTCATTATGCCAGCACTGGAGTATACTCACTTGAAGGCCGGCTGTTTCAAAAGAAGCAGCAGAATATGGTCTTGGAGAGACTAA 678 0.4838 MESSQGSQNEATQRQRRKSLKAMFLVLVNCVLMTIGQVGGPLLLRIYYLHGGKRKWLNAWLLTSGFPILILPMAFSYLRAQAKGQATVLLVTPRLVAASAFLGILLGLDGYLYSFGLSYLPISVSSLLGSTQLAFTAIFAFIVVKHKFTHYSVNAVVLMTFGSIVLGLHMNGDRPSGVSDGKYLLGFLMTLGAAALHGFIMPALEYTHLKAGCFKRSSRIWSWRD* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0484 225 PANTHER OS09G0467300 PROTEIN-RELATED 10 211 IPR030182 GO:0015211|GO:0016020
Vvi18g0484 225 Pfam Purine nucleobase transmembrane transport 25 212 - -
Vvi18g0484 225 SUPERFAMILY Multidrug resistance efflux transporter EmrE 91 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0484 Vvi-Chr18 4728333 4729498 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0484 25 211 Organic Solute Cotransporters AT1G28220 46.073 2.78e-62 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0484 - - vri:117906296 406.371