Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0481 ATGGCTCTCGCGGGCACTTCCATTATTCCCACCAATTCCAACTCCTTCCTTCAAACCCAAGCTCTTCCATCTTCGACCTCCAAATCCCACCAACCCTATCTTCTCACCAACCCCACCAAATCCGCATCTTTCCGACCCATCTCTGCCGTTCATTCCGCTGATCCCTCCAAGAATCCCGTCGTCTCCGATAAGTCCCCGAAGGCCCCCGCCGCCGCTGCCTCCTCTGCAGCCACCACTGCCTCTACCACTAAAGTCTCTGGTGCTGTTCCTGGCAAATGGAGCATAGAAAGCTGGAAATCCAAGAAGGCTTTGCAGCTCCCAGAATATCCGGATCCGGAGGATCTGGAGTCGGTTCTTCGTACCCTGGAAGCGTTCCCTCCCATTGTGTTCGCCGGAGAAGCCAGGAGCTTGGAGGAACGCCTTGCGGAAGCCGCCATGGGAAATGCTTTTCTCTTGCAGGGTGGTGATTGTGCCGAGAGTTTTAAGGAGTTCAATGCCAACAACATTCGTGACACCTTCAGAATTCTTCTTCAAATGGGCGCTGTTTTGATGTTCGGAGGGCAAGTTCCCGTAATCAAGGTCGGAAGAATGGCGGGTCAGTTTGCGAAGCCGAGGTCAGAATCGTTCGAGGAGAAGAATGGCGTGAAGCTGCCGAGTTACAGAGGTGATAATGTGAATGGAGATGCGTTCGATGTCAAATCGAGGACTCCGGACCCTCAGAGGATGATCAGAGCTTATTGCCAAGCTGCAGCTACCCTCAATCTCTTGAGGGCTTTCGCCACCGGAGGGTATGCTTCTATGCAGAGGGTGACCCAGTGGAATTTGGATTTCACAGAGCACAGTGAGCAGGGAGATAGGTATCGGGAACTAGCACACCGTGTTGATGAAGCCCTTGGTTTCATGGCTGCTGCTGGGCTCACAGTTGACCATCCTATTATGACAACAACTGAGTTCTGGACATCCCATGAGTGCTTGCTCTTGCCTTTCGAGCAGTCGCTTACTAGGGAGGATTCAACTTCTGGTCTTTACTATGACTGCTCTGCACACATGCTTTGGGTTGGAGAACGCACCCGACAGCTGGATGGTGCCCATGTTGAGTTCTTAAGAGGAGTTGCTAATCCCCTGGGCATTAAGGTGAGCGATAAGATGGACCCAAATGAGTTGGTTAAGCTGATTGAGATTTTGAATCCTCAGAACAAAGCGGGTAGGATAACGGTAATCACAAGAATGGGAGCTGAGAACATGAGAGTGAAGCTTCCACACCTAATTCGGGCAATTCGCAGGGCAGGGCAAATTGTCACATGGGTCAGTGATCCTATGCATGGAAACACCATCAAGGCTCCCTGTGGTCTCAAAACTCGCCCCTTCGATGCCATCAGGGCCGAAGTAAGAGCATTCTTTGACGTGCATGAGCAAGAAGGAAGCCACCCGGGAGGAGTTCATCTAGAGATGACAGGCCAAAATGTGACAGAGTGTATTGGTGGGTCACGAACTGTGACATTTGATGATTTGAGCTCACGCTACCACACCCATTGTGACCCTAGGCTCAATGCTTCTCAGTCTCTTGAGCTCGCTTTCATTATTGCAGAGCGCCTTAGGAAGAGAAGGATTGGATCCCAGCTGTCTCTGAACACCATGGGGCTGTAA 1647 0.5143 MALAGTSIIPTNSNSFLQTQALPSSTSKSHQPYLLTNPTKSASFRPISAVHSADPSKNPVVSDKSPKAPAAAASSAATTASTTKVSGAVPGKWSIESWKSKKALQLPEYPDPEDLESVLRTLEAFPPIVFAGEARSLEERLAEAAMGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQVPVIKVGRMAGQFAKPRSESFEEKNGVKLPSYRGDNVNGDAFDVKSRTPDPQRMIRAYCQAAATLNLLRAFATGGYASMQRVTQWNLDFTEHSEQGDRYRELAHRVDEALGFMAAAGLTVDHPIMTTTEFWTSHECLLLPFEQSLTREDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKAGRITVITRMGAENMRVKLPHLIRAIRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDAIRAEVRAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKRRIGSQLSLNTMGL* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0481 548 FunFam Phospho-2-dehydro-3-deoxyheptonate aldolase 282 534 - -
Vvi18g0481 548 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 45 541 IPR002480 GO:0003849|GO:0009073
Vvi18g0481 548 SUPERFAMILY Aldolase 89 533 - -
Vvi18g0481 548 MobiDBLite consensus disorder prediction 14 81 - -
Vvi18g0481 548 MobiDBLite consensus disorder prediction 14 46 - -
Vvi18g0481 548 Gene3D Aldolase class I 292 534 IPR013785 -
Vvi18g0481 548 Gene3D Aldolase class I 126 291 IPR013785 -
Vvi18g0481 548 NCBIfam 3-deoxy-7-phosphoheptulonate synthase class II 93 536 IPR002480 GO:0003849|GO:0009073
Vvi18g0481 548 Pfam Class-II DAHP synthetase family 93 529 IPR002480 GO:0003849|GO:0009073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0481 K01626 - vvi:100233115 1058.51