Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0480 ATGGAAGAGGAAAGTGATATTCGGCGCTGGGACGAGCTAATACCCGATGCTTTGGGTCTAATCTTTAGAAATCTTTCACTCCGGGAAATACTGACTGTGATTCCCAGGGTCTGCAAATCATGGGACGAAGCAGTGAAAGGGCCTTATTGCTGGCAAGAGATAGACATTGGAGAATGGAGTGACCAATGGCCGGAGCACCTTGATCGCATGCTTGAAATACTAATCAGAAGAAGCTGCGGTTCCCTCCGCAAGCTCTGCGTTTTCGGTCTCCAAAACGACAGGCTTCTCTCTTTCATTGCAGAACATGCTGGTTCTCTTCAGACCCTGCAACTGATAAGAAGCGAAATAAGTGATTCTCTAGTGGAAGAGATTGCTGGAAGGTTTTCAACACTCACTTTCTTGGATGTGAGTTGCTGCAATAAAATGGGCAGCCGAGCTCTTGAGGCCATTGGAAAGAACTGCAAATCGCTTGTGGGGCTGTGCCGGAACATGCACCCACTAACTACTGCAGGCAAGCTCTCGCAGGATGAGGAGGCTCACGCCATTGCCACCACAATGCCCAAGCTCAAGCACCTTGAGATGGCTTACCATCTTCTCAGCACAAAAAGTGTTCTTGAGATCCTCTCGTGCTGTCCCGAGCTTGAGCTTTTGGATTTGAGAGGGTGTTGGCATGTGGAACTTAACGTGAAGTTCCTCAAAGAGAAGTTCCCAAAATTGAGGGTCTTGGGGCCTGTTGTTGTGGACTACTGTCGGTATTATGAAATGAATGAATGTGACGATTACTCGGACTATGATGAGAGTTCAGATGGAACATGGGATGATGAGGGCGGGCTGGAAGAGCTAGAGGTGCGATTCTATGAAGGATTTGGCGAGCATCCAGAGTATGGTTAA 891 0.4815 MEEESDIRRWDELIPDALGLIFRNLSLREILTVIPRVCKSWDEAVKGPYCWQEIDIGEWSDQWPEHLDRMLEILIRRSCGSLRKLCVFGLQNDRLLSFIAEHAGSLQTLQLIRSEISDSLVEEIAGRFSTLTFLDVSCCNKMGSRALEAIGKNCKSLVGLCRNMHPLTTAGKLSQDEEAHAIATTMPKLKHLEMAYHLLSTKSVLEILSCCPELELLDLRGCWHVELNVKFLKEKFPKLRVLGPVVVDYCRYYEMNECDDYSDYDESSDGTWDDEGGLEELEVRFYEGFGEHPEYG* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0480 296 Gene3D - 10 50 - -
Vvi18g0480 296 FunFam F-box protein FBW2 53 263 - -
Vvi18g0480 296 PANTHER F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED 8 259 - -
Vvi18g0480 296 Gene3D Ribonuclease Inhibitor 51 268 IPR032675 -
Vvi18g0480 296 FunFam F-box protein FBW2 9 51 - -
Vvi18g0480 296 SUPERFAMILY RNI-like 35 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0480 Vvi-Chr18 4684278 4686251 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0480 - - vvi:100247293 609.757