Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0478 ATGAGATCCACCATTGGAGAAAGCTTTATAATAAGGAAAGTTTTAAGCAAAACCTTTAGGACATGGAATGATCTGCTGCTTTTCTCTATCGCAACAATCGAACTCTTCCTTCACACTCATTCCTCACCAATCCAGCTTTTCACACTCTCTGCATCACCTTCACCCCACTACTTTACCTTCTCAATGACTTCTACTTACCATTTCTCCATCTTTGTTTCACTTCTCCTACTCTCCTTCCTTCTCAACCCCACCTCCGCCACACCTCGAAAACTCTTCTCTCTTGTTCAAGAGCAACCTCTCATTCTCAAGTACCACAACGGGCCACTCCTTAAGGGCAACATCACCCTCAATCTCGTTTGGTACGGAAACTTCTCCCCCATCCAACGCTCCATACTCGTCGACTTCCTCCAGTCTCTCAATTCCCACACCACCACGCCCCACTCCGTCTCATCGTGGTGGCAGACCATCCAGAAGTACAAAGGAGTCTCCTGCACCCTCGCCGTTGGGAATCAGATCCTCGATGAAGACTACTCTCTAGGGAAGTCATTGCGAAGTTCAGACATCATTTCCTTGGCTTCTAGATCAAACCAAAGGAGCGAAATAACCGTGGTGTTCACGTCGGCAGACGTGGCGGTAGAAGGGTTCTGCATGAGCCGGTGCGGGACTCACGGGTCAACTCAGAGTAAGTGGGCCTACGCGTGGGTGGGTAACTCGGAGACTCAGTGTCCGGGTCAGTGCGCATGGCCATTTCACCAGCCCATGTATGGACCACAGACTCCGCCGCTGGTGTCTCCAAACGGGGACGTGGGAATTGACGGAATGCTGATCAATTTAGCGACTGTTTTGGCGGGAACGGTGACTAATCCGTTTGATAACGGCTACTTTCAAGGGTCGGCTAGCGCGCCGTTAGAGGCGGTGACGGCTTGTACAGGTATATTCGGGACAGGAGCTTATCCAGGATATCCCGGCGAAGTTCTGGCGGATGGAACGACTGGGGCTAGCTATAATGCTGTTGGGGTGGATGGGCGTAAATACTTATTGCCGGCGATGTGGGACCCTCAAACCTCCACCTGCAAGACATTAGTCTGA 1089 0.5124 MRSTIGESFIIRKVLSKTFRTWNDLLLFSIATIELFLHTHSSPIQLFTLSASPSPHYFTFSMTSTYHFSIFVSLLLLSFLLNPTSATPRKLFSLVQEQPLILKYHNGPLLKGNITLNLVWYGNFSPIQRSILVDFLQSLNSHTTTPHSVSSWWQTIQKYKGVSCTLAVGNQILDEDYSLGKSLRSSDIISLASRSNQRSEITVVFTSADVAVEGFCMSRCGTHGSTQSKWAYAWVGNSETQCPGQCAWPFHQPMYGPQTPPLVSPNGDVGIDGMLINLATVLAGTVTNPFDNGYFQGSASAPLEAVTACTGIFGTGAYPGYPGEVLADGTTGASYNAVGVDGRKYLLPAMWDPQTSTCKTLV* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0478 362 PANTHER PROTEIN EXORDIUM-LIKE 5 75 361 IPR006766 -
Vvi18g0478 362 Pfam Phosphate-induced protein 1 conserved region 102 361 IPR006766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0478 Vvi-Chr18 4659693 4663173 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0478 - - vvi:100242154 605.905