Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0473 ATGGGTTCCTTAGCCTCAGCTGAGAAGCCACATGCAGTTTGCATACCGTACCCAGCACAGGGCCACATAAACCCTATGCTAAAACTAGCAAAGTTCCTTCATTTCAGAGGGTTCCACATTACCTTTGTCAACACAGAGTACAACCATAACCGCCTGCTCAAATCTCGGGGTCCAGACTCCCTCAAAGGCATCCCCTCCTTCCAATTCAAGACCATTCCCGATGGTCTCCCTCCCTCCAATGTTGATGCCACCCAAGACACTCCCGCTCTCTGTGTCTCCACCACAAAACACTGCCTGCCTCCCTTTAGAGACCTTCTTTCCAACCTCAACCACGATGGCCCTCCAGTCACTTGCATAGTTTCTGATGGCGCCATGAGCTTCACTCTTGATGCTGCTCAAGAGCTTGGCGTTCCTGAAGTTCTTTTCTGGACAACTAGTGCTTGCGGCTTCATGGGCTACGTGCAATATCGCAATCTTATCGATAAGGGTTTGGCTCCACTCAAAGATGAGAGTTACCTAACAAATGGGTATCTGGATACCGTTATTGATTGGATACCGGGTATGAAAGGTATCCGTTTGAGGGATATCCCAAGCTTCATTCGAACGACGGACCCAAATGACATTATGCTGGAATTTCCATTGCGGGAGGCTGAAAGAGCTCGCAAGGCATCTGCCCTCATTTTCAATACATTTGATGCTCTAGAGCATGAAGTTTTGGATGCACTTTCTCAGATGTTTCCCCCAATCTACACCATCGGTCCCCTGCACAAACTCATGAGTCAGATCCAAGATAACGATTTGAAGTTGATGGAATCGAATCTGTGGAAAGAAGAGCCGGAATGTCTGGAGTGGCTGGACTCCAAAGAGCCCAACTCTGTTGTTTACGTGAATTTCGGGAGCGTCACGGTCATGACATCGCAGCAACTCAATGAGTTTGCTTGGGGACTGGTGAATAGCAATCAGACGTTCTTATGGATAATCAGGCCAGATCTTGTGTCCGGTGACGCGGCCATTCTTCCGCCAGAATTCGTGGCAGAGACGAAAGAGAGGGGTCTGTTAGCAGGTTGGTGTCCTCAAGAGCAAGTTCTCAGTCACCCGGCTGTTGGCGGCTTCTTAACTCACAACGGGTGGAATTCCACAATTGAAAGTGTGAGCGCTGGAGTGCCTATGATTTGTTGGCCCTTTTTTGCAGAGCAGCAAACCAACTGCCGCTACTGTTGCACTGAGTGGGGCATAGGCATGGAGATAGACAGCGACGTTAAGAGAGATGAAATTGAAAGGCTTGTGAAGGAGTTGATGGAGGGAGAGAAAGGCAAAGAGTTGAAGAAGAAGGCCTTGGAGTGGAAGGCTCTAGCAGAAGAGGCCACTAGAGGTCCCAATGGGTCGTCTTTCTCGAACTTGGACAAAATGATCACCCAAGCTCTTCTCTAG 1431 0.4906 MGSLASAEKPHAVCIPYPAQGHINPMLKLAKFLHFRGFHITFVNTEYNHNRLLKSRGPDSLKGIPSFQFKTIPDGLPPSNVDATQDTPALCVSTTKHCLPPFRDLLSNLNHDGPPVTCIVSDGAMSFTLDAAQELGVPEVLFWTTSACGFMGYVQYRNLIDKGLAPLKDESYLTNGYLDTVIDWIPGMKGIRLRDIPSFIRTTDPNDIMLEFPLREAERARKASALIFNTFDALEHEVLDALSQMFPPIYTIGPLHKLMSQIQDNDLKLMESNLWKEEPECLEWLDSKEPNSVVYVNFGSVTVMTSQQLNEFAWGLVNSNQTFLWIIRPDLVSGDAAILPPEFVAETKERGLLAGWCPQEQVLSHPAVGGFLTHNGWNSTIESVSAGVPMICWPFFAEQQTNCRYCCTEWGIGMEIDSDVKRDEIERLVKELMEGEKGKELKKKALEWKALAEEATRGPNGSSFSNLDKMITQALL* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0473 476 FunFam Glycosyltransferase 276 454 - -
Vvi18g0473 476 Gene3D Glycogen Phosphorylase B; 276 454 - -
Vvi18g0473 476 Gene3D Glycogen Phosphorylase B; 11 457 - -
Vvi18g0473 476 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 10 468 - -
Vvi18g0473 476 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 241 440 IPR002213 GO:0008194
Vvi18g0473 476 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 468 - -
Vvi18g0473 476 FunFam Glycosyltransferase 11 270 - -
Vvi18g0473 476 CDD GT1_Gtf-like 10 433 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0473 Vvi-Chr18 4629602 4631139 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0473 1 476 Glycosyltransferase AT1G22380 62.656 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0473 - - vvi:100248812 950.273