Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0472 ATGGGTTCCTTAGCCTCAGCTGAGAAGCCACATGCAGTTTGCATACCGTACCCAGCACAAGGCCACATAAACCCTATGCTAAAACTAGCTAAGTTCCTTCATTTCAGAGGGTTCCACATTACCTTTGTCAACACAGAGTACAACCATAACCGCCTGCTCAAATCTCGGGGTCCAGACTCCCTCAAGGGCATCCCCTCCTTCCAATTCAAGACCATTCCCGATGGTCTCCTTCCCTCCAATGTTGATGCCACCCAAGACATTCCCGCCCTCTGTGTCTCCACCAGAAAACACTGCCTGCCTCCCTTTAGAGACCTTCTTTCCAACCTCAACCACGATGGCCCTCCAGTCACTTGCATAGTTTCTGATGGCGCCATGAGCTTCACTCTTGATGCTGCTCAAGAGCTTGGCGTTCCTGAAGTTCTTTTCTGGACAACTAGTGCTTGCGGCTTCATGGGCTACGTGCAATATCGCAATCTTATCGATAAGGGTTTGGCTCCACTCAAAGATGAGAGTTACCTAACAAATGGGTATCTGGATACCGTTATTGATTGGATACCGGGTATGAAAGGTATCCGTTTGAGGGATATCCCAAGCTTCATTCGAACTACGGACCCAAATGAAATTATGCTGGAATTTCCATTGCGGGAGGCTGAAAGAGCTCGCAAGGCTTCTGCCCTCATTTTCAATACATTTGATGCTCTAGAGCATGAAGTTTTGGATGCACTTTCTCAGATGTTTCCCCCAATCTACACCATCGGTCCCCTGCACCAACTCATGAGTCAGATCCAAGATAACGATTTGAAGTTGATGGAATCGAATCTGTGGAAAGAAGAGCCGGAATGTCTGGAGTGGCTGGACTCCAAAGAGCCCAACTCTGTTGTTTACGTGAATTTCGGGAGCATCACAGTGATGACATCGCAGCAACTCAATGAGTTTGCTTGGGGACTTGTGAATAGCAATCAGACGTTCTTATGGATAATTAGGCCAGATCTTGTGTCCGGTGACGCGGCCATTCTTCCACCAGAATTCGTGGCAGAGACGAAAGAGAGGGGTCTGTTAGCAGGTTGGTGTCCTCAAGAGCAAGTTCTCAGTCACCCGGCTGTTGGCGGCTTCTTAACTCACAACGGATGGAATTCCACAATTGAAAGTGTGAGCGCTGGAGTGCCTATGATTTGTTGGCCCTTTTTTGCAGAGCAGCAAACCAACTGCCGCTACTGTTGCACTGAGTGGGGCATAGGCATGGAGATAGACAGCGATGTTAAGAGAGATGAAATTGAAAGGCTTGTGAAGGAGTTGATGGAGGGAGAGAAAGGCAAAGAGTTGAAGAAGAAGGCCTTGGAGTGGAAGACTCTAGCAGAAGAGGCCACTAGAGGTCCCAAGGGGTCGTCTTTCTCGAACTTGGACAAAATGATCACTCAAGCTCTTCTCTAG 1431 0.4836 MGSLASAEKPHAVCIPYPAQGHINPMLKLAKFLHFRGFHITFVNTEYNHNRLLKSRGPDSLKGIPSFQFKTIPDGLLPSNVDATQDIPALCVSTRKHCLPPFRDLLSNLNHDGPPVTCIVSDGAMSFTLDAAQELGVPEVLFWTTSACGFMGYVQYRNLIDKGLAPLKDESYLTNGYLDTVIDWIPGMKGIRLRDIPSFIRTTDPNEIMLEFPLREAERARKASALIFNTFDALEHEVLDALSQMFPPIYTIGPLHQLMSQIQDNDLKLMESNLWKEEPECLEWLDSKEPNSVVYVNFGSITVMTSQQLNEFAWGLVNSNQTFLWIIRPDLVSGDAAILPPEFVAETKERGLLAGWCPQEQVLSHPAVGGFLTHNGWNSTIESVSAGVPMICWPFFAEQQTNCRYCCTEWGIGMEIDSDVKRDEIERLVKELMEGEKGKELKKKALEWKTLAEEATRGPKGSSFSNLDKMITQALL* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0472 476 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 10 468 - -
Vvi18g0472 476 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 240 440 IPR002213 GO:0008194
Vvi18g0472 476 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 463 - -
Vvi18g0472 476 Gene3D Glycogen Phosphorylase B; 276 454 - -
Vvi18g0472 476 FunFam Glycosyltransferase 11 270 - -
Vvi18g0472 476 FunFam Glycosyltransferase 276 454 - -
Vvi18g0472 476 Gene3D Glycogen Phosphorylase B; 11 457 - -
Vvi18g0472 476 CDD GT1_Gtf-like 10 433 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0472 Vvi-Chr18 4613744 4615282 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0472 1 476 Glycosyltransferase AT1G22400 61.491 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0472 - - vvi:100243675 948.347