Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0471 ATGGAGAAGCCTCATGCAGTTTGCATACCATACCCAGCTCAAGGCCACATAAACCCTATGCTAAAATTAGCAAAGCTCCTCTGTTTCAAAGGCTTACATATTACTTTCGTCAACACGGAGTTTAACCATAAGCGCCTGGTCAAGTCCCGTGGCCCCAACTCCCTTGATGATCTGCCTTCCTTCCAATTCAAAACCATTTCCGATGGTCTCCCTCCGTCCGATGAAGACGCCACCCAAGATATCCGCTACCTCTGCGCCTCCACCAGAAAAAACTGCTTAGATCCTTTTCGAGACCTTCTTTCCCAACTTAACCACGACGGGCCTCCTGTCACTTGCATAGTCTCTGATGGTGCCATGAGCTTCACTCTTGATGCTGCCCAAGAACTGGCCATTCCTGACGTTCTTTTCTGGACAACTAGTACTTGTGGCTTCATGGGCTACTTGCAGTATCGCAATCTCATCGACAAGGGTTTTATACCCCTTAAAGACCCCAGTTACTTAACAAATGGGTATCTGGACACCGTTATTGATTGGATACCTGGTATGAGAGGTATTCGTCTGAAGGACATCCCGAGCTTCATTCGAACTACAGACCCAAATGAAATTATGCTGGACTTTCCATTGCATGAGGCTGAAAGAGCCCACAAAGCTTCTGCCCTCATTTTCAATACGTTTGATGCGAGAAGGATGTTTTGGATGCACTTTCACCAATGTTTCCTCCAATTTACACCATTGGTCCAAGATAATGATTTGCAGTTGATTGGATCAAATCTGTGGAAAGAAGAATGGGGTTTTTTCGAATGGCTCAACTCCAAAAAACACAACTCTGTTGTTTACGTGAATTTTGGAAGCGTGACAAGCCTGACAACAGATCAACTCAATGAGTTTGCTTGGGGACTGGCAAATAGCAATCAAACATTCTTATGGATAATAAGGCCGGATATTGTGTCTGGTGAGTCGGCCATTCTTCTGCCACAATTCTTGGCAGAGACCAAAAACAGGGGTCTGCTAGCAAGTTGGTGTCCTCAGGAGGAAGTTCTCAGCAACCCTGCCGTTGGTGGGTTCTTAACTCACAACGGGTGGAATTCCACTATGGAAAGTGTGAGTGCAGGAGTGCCCATGATTTGCTGGCCATTTTTCGCAGAGCAGCAAACCAACTGCCGCTACTGTTGCACAGAATGGGGCATAGGCACGGAGATCGACAGTGACGTTAAGAGAGATGAAGTTGAGAGGCTTGTGAGAGAATTGATCGAGGGAGACAAAGGCAAAGAGATGAAAAAGCAGGCCATGGAGTGGAAGAAGATGGCACAAAAGGCCACCATTGATTCAAATGGCTCATCTTACTCCAACTTGGACAAAATGATAAATCAAGTGTTTCTCCAAATCCCAAGCATTCCAACAAGTTAA 1407 0.4584 MEKPHAVCIPYPAQGHINPMLKLAKLLCFKGLHITFVNTEFNHKRLVKSRGPNSLDDLPSFQFKTISDGLPPSDEDATQDIRYLCASTRKNCLDPFRDLLSQLNHDGPPVTCIVSDGAMSFTLDAAQELAIPDVLFWTTSTCGFMGYLQYRNLIDKGFIPLKDPSYLTNGYLDTVIDWIPGMRGIRLKDIPSFIRTTDPNEIMLDFPLHEAERAHKASALIFNTFDARRMFWMHFHQCFLQFTPLVQDNDLQLIGSNLWKEEWGFFEWLNSKKHNSVVYVNFGSVTSLTTDQLNEFAWGLANSNQTFLWIIRPDIVSGESAILLPQFLAETKNRGLLASWCPQEEVLSNPAVGGFLTHNGWNSTMESVSAGVPMICWPFFAEQQTNCRYCCTEWGIGTEIDSDVKRDEVERLVRELIEGDKGKEMKKQAMEWKKMAQKATIDSNGSSYSNLDKMINQVFLQIPSIPTS* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0471 468 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 4 453 - -
Vvi18g0471 468 Gene3D Glycogen Phosphorylase B; 261 438 - -
Vvi18g0471 468 FunFam Glycosyltransferase 262 438 - -
Vvi18g0471 468 FunFam Glycosyltransferase 5 261 - -
Vvi18g0471 468 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 265 424 IPR002213 GO:0008194
Vvi18g0471 468 CDD GT1_Gtf-like 4 439 IPR002213 GO:0008194
Vvi18g0471 468 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 455 - -
Vvi18g0471 468 Gene3D Glycogen Phosphorylase B; 5 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0471 Vvi-Chr18 4610506 4612054 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0471 2 460 Glycosyltransferase AT1G22400 57.384 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0471 - - vvi:100243675 749.584