Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0470 ATGGGTTCCATGGAGAAGCCTCATGCAGTTTGCATTCCATACCCTGCTCAGGGGCACATCAATCCTATGCTAAAAGTAGCAAAGCTCCTCCATTTCAGAGGCTTTCGTATCACCTTTGTCAACACAGAGTTCAACCACACACGCTTACTCAAGGCCCAGGGCCCCAACTCCCTCAATGGTCTCCCCACCTTTCAGTTCGAAACCATTCCCGATGGTCTCCCACCGTCCAATGTCGACGCAACCCAAGACATCCCTTCCCTCTGTGCATCCACCAAAAAAAACTGTTTGGCTCCCTTTAGACGCCTTCTCGCCAAACTCAACGACAGAGGTCCTCCCGTCACTTGCATATTTTCTGACGCTGTCATGAGCTTCACTTTAGACGCGGCTCAAGAACTCGGCATTCCCGACCTTCTTTTATGGACAGCTAGTGCTTGTGGCTTCATGGCCTATGTGCAGTATCGCAGTCTCATCGACAAGGGTTTTACACCACTCAAAGATGAGAGTTATCTAACAAATGGGTATTTGGATACTGTTGTTGATTGGATACCGGGCATGAAAGGTATCCGTTTGAAGGATCTCCCGAGCTTCATTCGGACTACCGATCCAGATGATATCATGCTGGACTTTGCCATGGGTGAGCTTGAAAGGGCTCGCAAGGCTTCTGCCATCATTTTCAATACGTTTGACGCTTTAGAGCAGGAGGTTTTGGATGCAATTGCTCCCATGTATCCCCCAATCTACACCATTGGTCCTCTTCAGCTACTTCCGGATCAGATTCACGATAGCGAACTAAAGTTGATTGGATCAAATCTGTGGAAGGAAGAGCCTGAGTGTCTCAAATGGCTGGATTCCAAAGAACCCAACTCTGTTGTTTACGTTAATTATGGAAGCATCACAGTCATGACTCCCCAGCAACTGATTGAGTTTGCTTGGGGACTTGCAAATAGCAATCAAAGCTTCTTGTGGATTCTTAGGCCAGATCTCGTGTCTGGTGAGTCGGCCATTCTGCCACCAGAATTCGTGGCAGAAACAGAAGACAGGGGTTTACTAGCAGGTTGGTGTCCTCAAGAGCAAGTTCTCACGCACCAGGCCATTGGCGGCTTCTTAACTCATAACGGCTGGAATTCCACAATTGAGGGTTTATGCGCTGGAGTGCCTATGATTTGTTGGCCATTTTTTGCAGAGCAGCAAACCAACTGTCGTTACTGCTGCACTGAGTGGGGCGTAGGAATGGAGATAGACAGTGATGTTAAGAGGGATGAAGTTGCAAAGCTTGTGAGAGAGTTGATGGTGGGAGAGAAAGGCAAAGTAATGAAAAAGAAAACCATGGAGTGGAAGCATAGGGCAGAAGTGGCTACCACTGGTCCAGATGGATCATCTTACTTGAATTTGGAGAAAATATTTGAACAAGTGCTTCTCTAG 1422 0.4754 MGSMEKPHAVCIPYPAQGHINPMLKVAKLLHFRGFRITFVNTEFNHTRLLKAQGPNSLNGLPTFQFETIPDGLPPSNVDATQDIPSLCASTKKNCLAPFRRLLAKLNDRGPPVTCIFSDAVMSFTLDAAQELGIPDLLLWTASACGFMAYVQYRSLIDKGFTPLKDESYLTNGYLDTVVDWIPGMKGIRLKDLPSFIRTTDPDDIMLDFAMGELERARKASAIIFNTFDALEQEVLDAIAPMYPPIYTIGPLQLLPDQIHDSELKLIGSNLWKEEPECLKWLDSKEPNSVVYVNYGSITVMTPQQLIEFAWGLANSNQSFLWILRPDLVSGESAILPPEFVAETEDRGLLAGWCPQEQVLTHQAIGGFLTHNGWNSTIEGLCAGVPMICWPFFAEQQTNCRYCCTEWGVGMEIDSDVKRDEVAKLVRELMVGEKGKVMKKKTMEWKHRAEVATTGPDGSSYLNLEKIFEQVLL* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0470 473 Gene3D Glycogen Phosphorylase B; 8 454 - -
Vvi18g0470 473 CDD GT1_Gtf-like 7 453 IPR002213 GO:0008194
Vvi18g0470 473 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 7 465 - -
Vvi18g0470 473 FunFam Glycosyltransferase 273 451 - -
Vvi18g0470 473 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 240 439 IPR002213 GO:0008194
Vvi18g0470 473 Gene3D Glycogen Phosphorylase B; 273 451 - -
Vvi18g0470 473 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 464 - -
Vvi18g0470 473 FunFam Glycosyltransferase 8 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0470 Vvi-Chr18 4605469 4606985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi18g0470 5 473 Glycosyltransferase AT1G22400 61.181 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0470 - K21374 vvi:100265988 965.681