Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi18g0469 ATGCTCCAATTCCTCCCCGATGATCTCCGGTCGGCTACCGTCGAACTCGTCCCTTACTTTGCCGATAGTTTTGGGAATTCGAGTCGAATCGATTATGGAACCGGTCATGAGACCAATTTTGCTGCGTGGCTTTATTGTTTGGCTAGATTAGGGTTGCTCAAGGAAGAGGATTACCAGGCTCTTGTTTCTAGGGTTTTTGTGAAGTACCTTGAATTGATGAGGAAATTGCAATTCGTCTATTGCCTTGAACCTGCGGGATCCCATGGAGTTTGGGGTCTGGACGACTATCATTTTCTGCCATTTATATTTGGGTCGTCGCAGCTGATCGATCACAAGTATATGAAACCCAAGTCAATTCATAATCAGGATATTCTGGACAACTTCTCCAAGGAGTATATGTATATTTCTTGCATTGCATTTGTGAAGCAGGTGAAGAAAGGCCTATTTGCAGGGCATTCCCCATTGTTAGATGATATTAGTGGTGTAGCTAATTGGAACAAGGTGAATAGTGGGATGCTCAAAATGTATAAAGCTGAGGTGTTGGAGAAGGTTCCAATTATGCAGCATTTCCTATTTGGGTGGCTCATCAAATGCTTGTGCAGACGCTGGTATAGTGTTTCCTCCATTTCCATCAACAACAAAGTCACCATACCATACCGGGCTTAA 666 0.4354 MLQFLPDDLRSATVELVPYFADSFGNSSRIDYGTGHETNFAAWLYCLARLGLLKEEDYQALVSRVFVKYLELMRKLQFVYCLEPAGSHGVWGLDDYHFLPFIFGSSQLIDHKYMKPKSIHNQDILDNFSKEYMYISCIAFVKQVKKGLFAGHSPLLDDISGVANWNKVNSGMLKMYKAEVLEKVPIMQHFLFGWLIKCLCRRWYSVSSISINNKVTIPYRA* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi18g0469 221 CDD PTPA 3 193 IPR004327 GO:0019211
Vvi18g0469 221 FunFam Serine/threonine-protein phosphatase 2A activator 93 204 - -
Vvi18g0469 221 SUPERFAMILY PTPA-like 3 198 IPR037218 GO:0019211
Vvi18g0469 221 Gene3D - 93 201 IPR043170 -
Vvi18g0469 221 PIRSF PTPA 1 212 IPR004327 GO:0019211
Vvi18g0469 221 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B 2 197 IPR004327 GO:0019211
Vvi18g0469 221 Pfam Phosphotyrosyl phosphate activator (PTPA) protein 11 197 IPR004327 GO:0019211
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi18g0469 Vvi-Chr18 4600747 4602556 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi18g0469 K17605 - vvi:100259247 404.445